BLASTX nr result

ID: Angelica22_contig00047776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047776
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum]     124   1e-26
gb|AAT38797.2| Polyprotein, putative [Solanum demissum]               100   1e-19
gb|AAT38779.2| Polyprotein, putative [Solanum demissum]                93   2e-17
gb|AAT39281.2| Integrase core domain containing protein [Solanum...    93   2e-17
emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera]    86   3e-15

>gb|AAT38708.1| Putative polyprotein, identical [Solanum demissum]
          Length = 878

 Score =  124 bits (310), Expect = 1e-26
 Identities = 66/124 (53%), Positives = 78/124 (62%)
 Frame = -3

Query: 374 KAQLEMLLIDHDLFGHLDGXXXXXXXXXXXXXXXXXXPAYKNWLRQDKLIQTAMLASVDS 195
           KAQL MLL  H L GHL G                    Y+ W  QD+LIQ AM+ASVD 
Sbjct: 43  KAQLVMLLNGHKLIGHLIGAKSAPLTTITQTDSTIFIYEYELWFCQDQLIQQAMMASVDP 102

Query: 194 TLAHMVATASNSKLAWDSLHTTFSNKSHTRIFSLRDHLSRIMKGQKTIAEYLREIRSIAD 15
           T+   VATAS++K+AWD LHTT++NKSHTRIFSLRD L  + K  KT+A YL EIRSI D
Sbjct: 103 TITPTVATASSAKVAWDLLHTTYANKSHTRIFSLRDQLQNMKKASKTVATYLHEIRSIVD 162

Query: 14  ELSM 3
            L +
Sbjct: 163 ALKV 166


>gb|AAT38797.2| Polyprotein, putative [Solanum demissum]
          Length = 1793

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/81 (58%), Positives = 63/81 (77%)
 Frame = -3

Query: 248 WLRQDKLIQTAMLASVDSTLAHMVATASNSKLAWDSLHTTFSNKSHTRIFSLRDHLSRIM 69
           W RQD+LIQ A++ASVD T+A +VAT + +K  WD+LHT ++NKS TRIFSL D L+R+ 
Sbjct: 50  WFRQDQLIQNALMASVDPTIATIVATTNTAKTTWDALHTAYANKSQTRIFSLCDRLTRLT 109

Query: 68  KGQKTIAEYLREIRSIADELS 6
           K  + + EYL+ IRSI+DELS
Sbjct: 110 KDFQPVTEYLQHIRSISDELS 130


>gb|AAT38779.2| Polyprotein, putative [Solanum demissum]
          Length = 369

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/123 (42%), Positives = 70/123 (56%)
 Frame = -3

Query: 374 KAQLEMLLIDHDLFGHLDGXXXXXXXXXXXXXXXXXXPAYKNWLRQDKLIQTAMLASVDS 195
           KAQ+ ML+  H+LFGHL+G                  PA+ +W RQD+LIQ A+LASVD 
Sbjct: 39  KAQVSMLMRGHNLFGHLNGSRPAPARTVAQNNQDIENPAFVSWYRQDQLIQNAILASVDP 98

Query: 194 TLAHMVATASNSKLAWDSLHTTFSNKSHTRIFSLRDHLSRIMKGQKTIAEYLREIRSIAD 15
            L   V  AS S+ AWD+LHT ++ KS TRIF               +A+YL ++RS+ D
Sbjct: 99  NLIATVVAASISQAAWDALHTAYAKKSQTRIFK-----------TLPVADYLHQVRSLCD 147

Query: 14  ELS 6
           EL+
Sbjct: 148 ELA 150


>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
          Length = 1760

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/123 (42%), Positives = 70/123 (56%)
 Frame = -3

Query: 374 KAQLEMLLIDHDLFGHLDGXXXXXXXXXXXXXXXXXXPAYKNWLRQDKLIQTAMLASVDS 195
           KAQ+ ML+  H+LFGHL+G                  PA+ +W RQD+LIQ A+LASVD 
Sbjct: 39  KAQVSMLMRGHNLFGHLNGSRPAPARTVAQNNQDIENPAFVSWYRQDQLIQNAILASVDP 98

Query: 194 TLAHMVATASNSKLAWDSLHTTFSNKSHTRIFSLRDHLSRIMKGQKTIAEYLREIRSIAD 15
            L   V  AS S+ AWD+LHT ++ KS TRIF               +A+YL ++RS+ D
Sbjct: 99  NLIATVVAASISQAAWDALHTAYAKKSQTRIFK-----------TLPVADYLHQVRSLCD 147

Query: 14  ELS 6
           EL+
Sbjct: 148 ELA 150


>emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera]
          Length = 752

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
 Frame = -3

Query: 374 KAQLEMLLIDHDLFGHLDGXXXXXXXXXXXXXXXXXXPA-YKNWLRQDKLIQTAMLASVD 198
           KAQ + LL  +DL G LDG                     +  W+RQDKL+  A+LAS+ 
Sbjct: 45  KAQFDALLYGYDLMGFLDGTKTCPSKEIIVEYGTTVSNPNFSIWIRQDKLLLHAILASLS 104

Query: 197 STLAHMVATASNSKLAWDSLHTTFSNKSHTRIFSLRDHLSRIMKGQKTIAEYLREIRSIA 18
             +  ++ATA++S+ AW  LH  ++NKS +R+ +L++ L+ I    +++AEYL+ I+ I 
Sbjct: 105 KGVVPLIATATSSRDAWVKLHKLYANKSRSRVMNLKEKLTNITCNTRSVAEYLQTIKGIV 164

Query: 17  DELSM 3
           DEL++
Sbjct: 165 DELAL 169


Top