BLASTX nr result

ID: Angelica22_contig00047684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047684
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi...   144   8e-33
emb|CBI41082.3| unnamed protein product [Vitis vinifera]              144   8e-33
ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
emb|CBI28140.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27

>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  144 bits (363), Expect = 8e-33
 Identities = 73/98 (74%), Positives = 81/98 (82%)
 Frame = -2

Query: 294 IPGSSSIEVGNVVVEFIAGDKSHLQSDQIYKMLSEIMHRLKEAGYEPLTTSVLQDIDEKE 115
           +PGSSSIEV N V EF+AGD+SH +S +I +MLSEI  RLK  GY PLT SVLQD DEKE
Sbjct: 505 VPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKE 564

Query: 114 KETLLAHHSEKLAIAFGILNTAPGVPIRIVKNLRVCDD 1
           KE  LAHHSEKLAIAFG+L+TAPG  IRIVKNLRVCDD
Sbjct: 565 KENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDD 602


>emb|CBI41082.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  144 bits (363), Expect = 8e-33
 Identities = 73/98 (74%), Positives = 81/98 (82%)
 Frame = -2

Query: 294 IPGSSSIEVGNVVVEFIAGDKSHLQSDQIYKMLSEIMHRLKEAGYEPLTTSVLQDIDEKE 115
           +PGSSSIEV N V EF+AGD+SH +S +I +MLSEI  RLK  GY PLT SVLQD DEKE
Sbjct: 278 VPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKE 337

Query: 114 KETLLAHHSEKLAIAFGILNTAPGVPIRIVKNLRVCDD 1
           KE  LAHHSEKLAIAFG+L+TAPG  IRIVKNLRVCDD
Sbjct: 338 KENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDD 375


>ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|222854636|gb|EEE92183.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  127 bits (319), Expect = 1e-27
 Identities = 62/98 (63%), Positives = 75/98 (76%)
 Frame = -2

Query: 294 IPGSSSIEVGNVVVEFIAGDKSHLQSDQIYKMLSEIMHRLKEAGYEPLTTSVLQDIDEKE 115
           IPGS+ IE+ N + EF+AGDKSH QS +IY+M+ E+   +K AGY P TT VL DID+++
Sbjct: 352 IPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDED 411

Query: 114 KETLLAHHSEKLAIAFGILNTAPGVPIRIVKNLRVCDD 1
           KE  L  HSEKLAIAF +LNT PG  IRIVKNLRVCDD
Sbjct: 412 KEDTLNRHSEKLAIAFALLNTPPGTLIRIVKNLRVCDD 449


>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/97 (64%), Positives = 75/97 (77%)
 Frame = -2

Query: 291 PGSSSIEVGNVVVEFIAGDKSHLQSDQIYKMLSEIMHRLKEAGYEPLTTSVLQDIDEKEK 112
           PG S+IEVG VV EF+ GD SH QS +IY+ L ++M RLK AGY P  + VL D+DEKEK
Sbjct: 446 PGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEK 505

Query: 111 ETLLAHHSEKLAIAFGILNTAPGVPIRIVKNLRVCDD 1
           E  L+ HSEKLAIAFG+L+T PG PIR+VKNLRVC D
Sbjct: 506 ENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSD 542


>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/97 (64%), Positives = 75/97 (77%)
 Frame = -2

Query: 291 PGSSSIEVGNVVVEFIAGDKSHLQSDQIYKMLSEIMHRLKEAGYEPLTTSVLQDIDEKEK 112
           PG S+IEVG VV EF+ GD SH QS +IY+ L ++M RLK AGY P  + VL D+DEKEK
Sbjct: 577 PGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEK 636

Query: 111 ETLLAHHSEKLAIAFGILNTAPGVPIRIVKNLRVCDD 1
           E  L+ HSEKLAIAFG+L+T PG PIR+VKNLRVC D
Sbjct: 637 ENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSD 673


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