BLASTX nr result

ID: Angelica22_contig00047605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047605
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15227.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containi...   110   9e-23
ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|NP_177601.1| pentatricopeptide repeat-containing protein [Ar...    99   5e-19

>emb|CBI15227.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/83 (63%), Positives = 64/83 (77%)
 Frame = -3

Query: 251 EHLCISLLNLCKSLKSIKQVHALAYKTGLKNDPLIAGKFLLHCAVLITDAIEYAHRLFLD 72
           +HLC SLL  C+SLK++KQVHA   KTGL  DP+IAGK LLH AV + DA++YA RLFL 
Sbjct: 5   QHLCSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLH 64

Query: 71  SPEPDVFMYNTLIRGFSESNFRQ 3
            P PDVFM+NTLIRG +ES+  Q
Sbjct: 65  FPNPDVFMHNTLIRGLAESDTPQ 87


>ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/83 (63%), Positives = 64/83 (77%)
 Frame = -3

Query: 251 EHLCISLLNLCKSLKSIKQVHALAYKTGLKNDPLIAGKFLLHCAVLITDAIEYAHRLFLD 72
           +HLC SLL  C+SLK++KQVHA   KTGL  DP+IAGK LLH AV + DA++YA RLFL 
Sbjct: 5   QHLCSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLH 64

Query: 71  SPEPDVFMYNTLIRGFSESNFRQ 3
            P PDVFM+NTLIRG +ES+  Q
Sbjct: 65  FPNPDVFMHNTLIRGLAESDTPQ 87


>ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|222838272|gb|EEE76637.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  104 bits (260), Expect = 6e-21
 Identities = 48/80 (60%), Positives = 63/80 (78%)
 Frame = -3

Query: 251 EHLCISLLNLCKSLKSIKQVHALAYKTGLKNDPLIAGKFLLHCAVLITDAIEYAHRLFLD 72
           E LC+SLLN+CKSL + KQ+HA   K GL++DP IAGK L HCA+ ++D+++YA RLF  
Sbjct: 5   EPLCLSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRY 64

Query: 71  SPEPDVFMYNTLIRGFSESN 12
           +P PDVFM+NTLIRG  ES+
Sbjct: 65  TPNPDVFMHNTLIRGLYESD 84


>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
           gi|449487109|ref|XP_004157499.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/77 (58%), Positives = 61/77 (79%)
 Frame = -3

Query: 242 CISLLNLCKSLKSIKQVHALAYKTGLKNDPLIAGKFLLHCAVLITDAIEYAHRLFLDSPE 63
           C++L + CKSL+++KQ+ AL +KT L + PL++GK LLHCAV + D++ YA RLFLD   
Sbjct: 8   CLALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRN 67

Query: 62  PDVFMYNTLIRGFSESN 12
           PDVFMYNTLIRG S+S+
Sbjct: 68  PDVFMYNTLIRGLSDSD 84


>ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g74630 gi|12324801|gb|AAG52363.1|AC011765_15
           hypothetical protein; 86841-88772 [Arabidopsis thaliana]
           gi|332197495|gb|AEE35616.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 643

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/79 (54%), Positives = 58/79 (73%)
 Frame = -3

Query: 248 HLCISLLNLCKSLKSIKQVHALAYKTGLKNDPLIAGKFLLHCAVLITDAIEYAHRLFLDS 69
           H C+SLLN CK+L+++ Q+H L  K G+  D    GK +LHCA+ I+DA+ YA RL L  
Sbjct: 6   HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65

Query: 68  PEPDVFMYNTLIRGFSESN 12
           PEPD FM+NTL+RG+SES+
Sbjct: 66  PEPDAFMFNTLVRGYSESD 84


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