BLASTX nr result

ID: Angelica22_contig00047516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047516
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subc...   111   7e-23
ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group] g...   111   7e-23
gb|AAM01114.1|AC098682_18 Putative retroelement [Oryza sativa Ja...   108   3e-22
ref|XP_003571836.1| PREDICTED: uncharacterized protein LOC100834...   108   3e-22
ref|NP_001172189.1| Os01g0160300 [Oryza sativa Japonica Group] g...   105   3e-21

>gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 904

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/106 (50%), Positives = 78/106 (73%)
 Frame = -3

Query: 318 YTVWAMKMRVFMQAHGVWDAIEPKDPKATVEDKIDKRALAMIYQGITEDLLLTLAERTTA 139
           Y+ WA+KM   M+A G+WDAIEP   +A V+ K DK+A A ++  + ED+L  +A++ TA
Sbjct: 451 YSTWAIKMEANMEAQGIWDAIEPAADEA-VDIKKDKQARACLFGAVPEDVLQQIAKKKTA 509

Query: 138 KDAWEAIKTVSLGAEKVKKAKAQTLKSEFEALSMKDSDRLDDFCMK 1
           K+ WE++KT  LG E+VKKA+ QTLKS+F+AL MKD++ +D+F  K
Sbjct: 510 KEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESIDEFAGK 555


>ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group]
           gi|113534520|dbj|BAF06903.1| Os01g0879800 [Oryza sativa
           Japonica Group]
          Length = 278

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/106 (50%), Positives = 78/106 (73%)
 Frame = -3

Query: 318 YTVWAMKMRVFMQAHGVWDAIEPKDPKATVEDKIDKRALAMIYQGITEDLLLTLAERTTA 139
           Y+ WA+KM   M+A G+WDAIEP   +A V+ K DK+A A ++  + ED+L  +A++ TA
Sbjct: 38  YSTWAIKMEANMEAQGIWDAIEPAADEA-VDIKKDKQARACLFGAVPEDVLQQIAKKKTA 96

Query: 138 KDAWEAIKTVSLGAEKVKKAKAQTLKSEFEALSMKDSDRLDDFCMK 1
           K+ WE++KT  LG E+VKKA+ QTLKS+F+AL MKD++ +D+F  K
Sbjct: 97  KEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTESIDEFAGK 142


>gb|AAM01114.1|AC098682_18 Putative retroelement [Oryza sativa Japonica Group]
           gi|22725941|gb|AAN04951.1| Putative retroelement [Oryza
           sativa Japonica Group] gi|31431112|gb|AAP52934.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 299

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/106 (47%), Positives = 75/106 (70%)
 Frame = -3

Query: 318 YTVWAMKMRVFMQAHGVWDAIEPKDPKATVEDKIDKRALAMIYQGITEDLLLTLAERTTA 139
           Y  W++ M+V MQA GVWDA+E        E +ID+ ALA I Q +  ++L TLA + TA
Sbjct: 57  YIEWSLLMKVNMQAQGVWDAVE----LGNTEHRIDRMALAAILQAVPSEMLATLASKDTA 112

Query: 138 KDAWEAIKTVSLGAEKVKKAKAQTLKSEFEALSMKDSDRLDDFCMK 1
           K+AWEA++T+ +G E+V++AKAQ+L+ EFE + MK+ + +DDF M+
Sbjct: 113 KEAWEAVRTMRMGVERVREAKAQSLRKEFELIRMKEGESVDDFAMR 158


>ref|XP_003571836.1| PREDICTED: uncharacterized protein LOC100834324 [Brachypodium
           distachyon]
          Length = 295

 Score =  108 bits (271), Expect = 3e-22
 Identities = 45/107 (42%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
 Frame = -3

Query: 318 YTVWAMKMRVFMQAHGVWDAIEPK-DPKATVEDKIDKRALAMIYQGITEDLLLTLAERTT 142
           Y++WA+KMR  M+A GVW+A++P    K  +++K D+ A+  I+QGI EDL++ + ++  
Sbjct: 19  YSIWAIKMRAIMRAQGVWEAVDPDASNKVAIDEKKDETAIVAIHQGIPEDLVIMITDKKA 78

Query: 141 AKDAWEAIKTVSLGAEKVKKAKAQTLKSEFEALSMKDSDRLDDFCMK 1
           A++AWE +KT+ L  +++K+A+ QTL SEF  L +KD++ +DDF ++
Sbjct: 79  AREAWETLKTIRLADDRIKEARVQTLTSEFHRLQVKDTEFVDDFTLR 125


>ref|NP_001172189.1| Os01g0160300 [Oryza sativa Japonica Group]
           gi|9757691|dbj|BAB08210.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255672895|dbj|BAH90919.1| Os01g0160300 [Oryza sativa
           Japonica Group]
          Length = 305

 Score =  105 bits (263), Expect = 3e-21
 Identities = 46/106 (43%), Positives = 77/106 (72%)
 Frame = -3

Query: 318 YTVWAMKMRVFMQAHGVWDAIEPKDPKATVEDKIDKRALAMIYQGITEDLLLTLAERTTA 139
           Y +WA+KM++FM A GVW A+E        ++KID+ ALA I Q + E +++ ++E+ TA
Sbjct: 42  YGIWAVKMKIFMHAQGVWAAVEGD----AADEKIDQMALAAIVQAVPEAVVMAISEKETA 97

Query: 138 KDAWEAIKTVSLGAEKVKKAKAQTLKSEFEALSMKDSDRLDDFCMK 1
           K+AW+A+K +++G E+VKKA+ QTLK E + + M +S++++DF +K
Sbjct: 98  KEAWDALKQMNMGEERVKKARVQTLKRELDGMYMSNSEKINDFALK 143


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