BLASTX nr result
ID: Angelica22_contig00047504
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00047504
(324 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containi... 127 7e-28
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 125 5e-27
emb|CBI30711.3| unnamed protein product [Vitis vinifera] 125 5e-27
ref|XP_002522236.1| pentatricopeptide repeat-containing protein,... 124 8e-27
ref|XP_003608008.1| Pentatricopeptide repeat-containing protein ... 115 5e-24
>ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 127 bits (320), Expect = 7e-28
Identities = 59/105 (56%), Positives = 78/105 (74%)
Frame = -1
Query: 315 DYNLEILKACEMGNLKEAMRLFSHPEKLSLDSKTCCAILQLCAEFKALNEGKKVHDFVGG 136
D N +I K CEMG+L+ AM+L S ++ L+ T C++LQLCAE K+L +GK+VH +
Sbjct: 26 DKNAKICKFCEMGDLRNAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISS 85
Query: 135 IGGEIDEFVCAKLVFMYVNCGDLDEGRRVFDTIENEKVFLWNLLI 1
G IDE + AKLVFMYVNCGDL +GRR+FD I N+K+FLWNLL+
Sbjct: 86 NGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLM 130
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = -1
Query: 318 FDYNLEILKACEMGNLKEAMRLFSHPEKLSL--DSKTCCAILQLCAEFKALNEGKKVHDF 145
F +NL + + ++GN +E++ LF ++L + DS T +L+ A + E K+VH +
Sbjct: 124 FLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGY 183
Query: 144 VGGIGGEIDEFVCAKLVFMYVNCGDLDEGRRVFDTIENEKVFLWNLLI 1
V +G V L+ Y CG+++ R +FD + + V WN +I
Sbjct: 184 VLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMI 231
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = -1
Query: 267 EAMRLFSHPEK-LSLDSKTCCAILQLCAEFKALNEGKKVHDFVGGIGGEIDEFVCAKLVF 91
EA++LF +K L D T +L CA AL +G+++H + G D V LV
Sbjct: 444 EALQLFLDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVD 503
Query: 90 MYVNCGDLDEGRRVFDTIENEKVFLWNLLI 1
MYV CG L +++FD I + + LW ++I
Sbjct: 504 MYVKCGLLVLAQQLFDMIPKKDMILWTVMI 533
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 125 bits (313), Expect = 5e-27
Identities = 54/105 (51%), Positives = 77/105 (73%)
Frame = -1
Query: 315 DYNLEILKACEMGNLKEAMRLFSHPEKLSLDSKTCCAILQLCAEFKALNEGKKVHDFVGG 136
DYN+EI + CE+GNL+ AM L + K L+ +T C++LQLCA+ K++ +G+++H +
Sbjct: 70 DYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQS 129
Query: 135 IGGEIDEFVCAKLVFMYVNCGDLDEGRRVFDTIENEKVFLWNLLI 1
E+D + +KLVFMYV CGDL EGRR+FD + NEKVFLWNLL+
Sbjct: 130 NDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLM 174
>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 125 bits (313), Expect = 5e-27
Identities = 54/105 (51%), Positives = 77/105 (73%)
Frame = -1
Query: 315 DYNLEILKACEMGNLKEAMRLFSHPEKLSLDSKTCCAILQLCAEFKALNEGKKVHDFVGG 136
DYN+EI + CE+GNL+ AM L + K L+ +T C++LQLCA+ K++ +G+++H +
Sbjct: 70 DYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQS 129
Query: 135 IGGEIDEFVCAKLVFMYVNCGDLDEGRRVFDTIENEKVFLWNLLI 1
E+D + +KLVFMYV CGDL EGRR+FD + NEKVFLWNLL+
Sbjct: 130 NDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLM 174
Score = 55.1 bits (131), Expect = 6e-06
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = -1
Query: 264 AMRLFSHPEKLSL--DSKTCCAILQLCAEFKALNEGKKVHDFVGGIGGEIDEFVCAKLVF 91
++RLF EK L +S T IL CA AL G+++H + G +D V LV
Sbjct: 309 SVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVD 368
Query: 90 MYVNCGDLDEGRRVFDTIENEKVFLWNLLI 1
MY+ CG L R +FD I + + W ++I
Sbjct: 369 MYLKCGALGLARLLFDMIPEKDLVSWTVMI 398
>ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538489|gb|EEF40094.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 640
Score = 124 bits (311), Expect = 8e-27
Identities = 58/105 (55%), Positives = 75/105 (71%)
Frame = -1
Query: 315 DYNLEILKACEMGNLKEAMRLFSHPEKLSLDSKTCCAILQLCAEFKALNEGKKVHDFVGG 136
D+N +I + CE+G+LK A+ L K ++DS T C+ILQLCAE +L EGKKVH F+
Sbjct: 68 DFNRKICELCEVGSLKNAIELLDMYPKSNIDSNTYCSILQLCAELNSLQEGKKVHSFISS 127
Query: 135 IGGEIDEFVCAKLVFMYVNCGDLDEGRRVFDTIENEKVFLWNLLI 1
G +D + KLVFMYVNCGD+ EGR +FD I NEKVFLWNL++
Sbjct: 128 SGIFVDGLLGTKLVFMYVNCGDIREGRVIFDKIANEKVFLWNLML 172
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = -1
Query: 267 EAMRLFSHPEKLSL--DSKTCCAILQLCAEFKALNEGKKVHDFVGGIGGEIDEFVCAKLV 94
E +RLF E+ + D+ T A+L CA +L GK VHD+V + D VC L+
Sbjct: 385 EGIRLFHEMEREGVRPDNFTVTAVLHACACSGSLEIGKDVHDYVKENNMQKDRIVCNSLM 444
Query: 93 FMYVNCGDLDEGRRVFDTIENEKVFLWNLLI 1
MY CG +++ VF + N+ + WN +I
Sbjct: 445 DMYAKCGSMEDANLVFLEMPNKDIVSWNTMI 475
>ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 115 bits (287), Expect = 5e-24
Identities = 55/103 (53%), Positives = 74/103 (71%)
Frame = -1
Query: 309 NLEILKACEMGNLKEAMRLFSHPEKLSLDSKTCCAILQLCAEFKALNEGKKVHDFVGGIG 130
N +I K CEMG+L+ A+ L + + L + C++LQLCAE K+L +GK+VH + G
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNG 399
Query: 129 GEIDEFVCAKLVFMYVNCGDLDEGRRVFDTIENEKVFLWNLLI 1
IDE + AKLVFMYVNCGDL +GR++FD I N+KVFLWNLL+
Sbjct: 400 ISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLM 442