BLASTX nr result

ID: Angelica22_contig00047496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047496
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
emb|CBI30711.3| unnamed protein product [Vitis vinifera]              147   7e-34
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]        147   9e-34

>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  148 bits (373), Expect = 5e-34
 Identities = 68/98 (69%), Positives = 78/98 (79%)
 Frame = -1

Query: 418 QKNMKEQGDSLNMRYALTNADEMQKEEARCGHSEKLAMTFGILRLPPGKIIRVTKNLRVC 239
           +  MKE+G     RYAL NAD +QKE A CGHSEKLAM FGIL LPP + IRV+KNLRVC
Sbjct: 472 RSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVC 531

Query: 238 SDCHEMAKYISKVIGREILLRDSRRFHHFQEGCCSCRG 125
            DCHEMAK+ISK +GREI+LRDS RFHHF++G C CRG
Sbjct: 532 GDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRG 569


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/98 (70%), Positives = 78/98 (79%)
 Frame = -1

Query: 418  QKNMKEQGDSLNMRYALTNADEMQKEEARCGHSEKLAMTFGILRLPPGKIIRVTKNLRVC 239
            +  MKE+G S    YAL NADE +KE A CGHSEKLAM FG+L LPPGK IRVTKNLRVC
Sbjct: 827  RSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVC 886

Query: 238  SDCHEMAKYISKVIGREILLRDSRRFHHFQEGCCSCRG 125
             DCHEMAK++SK   REI+LRDS RFHHF++G CSCRG
Sbjct: 887  GDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRG 924


>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/95 (69%), Positives = 79/95 (83%)
 Frame = -1

Query: 409  MKEQGDSLNMRYALTNADEMQKEEARCGHSEKLAMTFGILRLPPGKIIRVTKNLRVCSDC 230
            MKE+G    MRYAL  AD+ +KE A CGHSEK+AM FGIL LPPGK +RVTKNLRVC DC
Sbjct: 728  MKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDC 787

Query: 229  HEMAKYISKVIGREILLRDSRRFHHFQEGCCSCRG 125
            HEMAK++SK++ R+I+LRDS RFHHF++G CSCRG
Sbjct: 788  HEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRG 822


>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/95 (69%), Positives = 79/95 (83%)
 Frame = -1

Query: 409 MKEQGDSLNMRYALTNADEMQKEEARCGHSEKLAMTFGILRLPPGKIIRVTKNLRVCSDC 230
           MKE+G    MRYAL  AD+ +KE A CGHSEK+AM FGIL LPPGK +RVTKNLRVC DC
Sbjct: 601 MKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDC 660

Query: 229 HEMAKYISKVIGREILLRDSRRFHHFQEGCCSCRG 125
           HEMAK++SK++ R+I+LRDS RFHHF++G CSCRG
Sbjct: 661 HEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRG 695


>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/98 (70%), Positives = 79/98 (80%)
 Frame = -1

Query: 418 QKNMKEQGDSLNMRYALTNADEMQKEEARCGHSEKLAMTFGILRLPPGKIIRVTKNLRVC 239
           ++ MKE+G     +YAL NADEMQKE A CGHSEKLAM FG+L LPP K IRVTKNLRVC
Sbjct: 706 RRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVC 765

Query: 238 SDCHEMAKYISKVIGREILLRDSRRFHHFQEGCCSCRG 125
            DCHEMAK++SK   REI+LRDS RFHHF++G CSCRG
Sbjct: 766 GDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRG 803


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