BLASTX nr result

ID: Angelica22_contig00047465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047465
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]    98   8e-19
ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
ref|XP_002512558.1| pentatricopeptide repeat-containing protein,...    85   7e-15
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12

>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
 Frame = -2

Query: 282 FCSVPLKPQL-----IPSLQPSNDADLISQILLEHHNPFHSMESSLQLHGISXXXXXXXX 118
           F S+P  P       +PSLQPS DADLIS+ILL+HHNPFH+MESSLQL+GI+        
Sbjct: 29  FSSIPQPPDDALSTGLPSLQPSYDADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQ 88

Query: 117 XXXXXXXLSKIAFAFFSWAKTQPHLVPDVMAYNIVIDSL 1
                  +SKIA +FF WAK Q H   DV++YN++ID L
Sbjct: 89  TLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDIL 127


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
 Frame = -2

Query: 282 FCSVPLKPQL-----IPSLQPSNDADLISQILLEHHNPFHSMESSLQLHGISXXXXXXXX 118
           F S+P  P       +PSLQPS DADLIS+ILL+HHNPFH+MESSLQL+GI+        
Sbjct: 29  FSSIPQPPDDALSTGLPSLQPSYDADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQ 88

Query: 117 XXXXXXXLSKIAFAFFSWAKTQPHLVPDVMAYNIVIDSL 1
                  +SKIA +FF WAK Q H   DV++YN++ID L
Sbjct: 89  TLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDIL 127


>ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Cucumis sativus]
           gi|449523938|ref|XP_004168980.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Cucumis sativus]
          Length = 506

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/92 (48%), Positives = 55/92 (59%)
 Frame = -2

Query: 276 SVPLKPQLIPSLQPSNDADLISQILLEHHNPFHSMESSLQLHGISXXXXXXXXXXXXXXX 97
           S+     L+P +QPS DADL+SQILL HHNPFHSMESSLQLH IS               
Sbjct: 21  SIRFLSSLLPQIQPSKDADLVSQILLHHHNPFHSMESSLQLHSISFSSHLLDQTLLRLTH 80

Query: 96  LSKIAFAFFSWAKTQPHLVPDVMAYNIVIDSL 1
            SKIA +FF +A + P       +YNI++D L
Sbjct: 81  HSKIALSFFDYANSLPSNPISTTSYNILLDIL 112


>ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548519|gb|EEF50010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 511

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/84 (47%), Positives = 55/84 (65%)
 Frame = -2

Query: 252 IPSLQPSNDADLISQILLEHHNPFHSMESSLQLHGISXXXXXXXXXXXXXXXLSKIAFAF 73
           +PSL+PSNDA+++S+ILL HHNPFH+MESSLQLHGI+                SKIA +F
Sbjct: 30  LPSLEPSNDAEIVSEILLNHHNPFHAMESSLQLHGITLSSSLLHQTLLRLRHNSKIALSF 89

Query: 72  FSWAKTQPHLVPDVMAYNIVIDSL 1
           F ++ + P    +   YN++ID L
Sbjct: 90  FHYSLSLPSSSVNTTTYNLIIDIL 113


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/74 (52%), Positives = 46/74 (62%)
 Frame = -2

Query: 270 PLKPQLIPSLQPSNDADLISQILLEHHNPFHSMESSLQLHGISXXXXXXXXXXXXXXXLS 91
           P    L+P+LQPSNDADL+SQILL HHNPFH+MESSLQL GIS                S
Sbjct: 42  PRNDTLLPTLQPSNDADLLSQILLHHHNPFHAMESSLQLPGISLTPSLLHQTLLRLRHNS 101

Query: 90  KIAFAFFSWAKTQP 49
           KIA + F  + + P
Sbjct: 102 KIALSLFHHSLSLP 115


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