BLASTX nr result

ID: Angelica22_contig00047430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047430
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...   124   1e-26
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...   124   1e-26
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   124   1e-26
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   124   1e-26
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   121   5e-26

>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
            200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/78 (78%), Positives = 71/78 (91%)
 Frame = -2

Query: 234  LEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLMS 55
            LEILASA+EY +LP+R GEEELIR+LINHQRFSF++PKCTDP VKANALLQA+FSRQ + 
Sbjct: 1878 LEILASASEYALLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFSRQSVG 1937

Query: 54   GNLATDQKEVLSSASRLL 1
            GNLA DQ+EV+ SASRLL
Sbjct: 1938 GNLALDQREVVISASRLL 1955


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Cucumis sativus]
          Length = 2175

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/78 (78%), Positives = 71/78 (91%)
 Frame = -2

Query: 234  LEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLMS 55
            LEILASA+EY +LP+R GEEELIR+LINHQRFSF++PKCTDP VKANALLQA+FSRQ + 
Sbjct: 1878 LEILASASEYALLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFSRQSVG 1937

Query: 54   GNLATDQKEVLSSASRLL 1
            GNLA DQ+EV+ SASRLL
Sbjct: 1938 GNLALDQREVVISASRLL 1955


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/78 (75%), Positives = 70/78 (89%)
 Frame = -2

Query: 234  LEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLMS 55
            LEILASA+EY  +P+R GEE+LIR+LINHQRFSF++PKCTDP +KANALLQAHFSRQ++ 
Sbjct: 1880 LEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSRQIVG 1939

Query: 54   GNLATDQKEVLSSASRLL 1
            GNLA DQ+EVL SA RLL
Sbjct: 1940 GNLALDQREVLLSAGRLL 1957


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/78 (75%), Positives = 70/78 (89%)
 Frame = -2

Query: 234  LEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLMS 55
            LEILASA+EY  +P+R GEE+LIR+LINHQRFSF++PKCTDP +KANALLQAHFSRQ++ 
Sbjct: 1847 LEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSRQIVG 1906

Query: 54   GNLATDQKEVLSSASRLL 1
            GNLA DQ+EVL SA RLL
Sbjct: 1907 GNLALDQREVLLSAGRLL 1924


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = -2

Query: 234  LEILASAAEYEVLPVRLGEEELIRKLINHQRFSFDSPKCTDPRVKANALLQAHFSRQLMS 55
            LEIL+SA+EY  LP+R GEEE++RKLINHQRFSF++PK TDP VKANALLQAHFSRQ + 
Sbjct: 1884 LEILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFSRQFVG 1943

Query: 54   GNLATDQKEVLSSASRLL 1
            GNLA DQKEVL SA+RLL
Sbjct: 1944 GNLALDQKEVLLSANRLL 1961


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