BLASTX nr result

ID: Angelica22_contig00047273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047273
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98071.1| retrotransposon protein, putative, unclassified [...    67   2e-09
gb|ABF97694.1| retrotransposon protein, putative, unclassified [...    67   2e-09
gb|AAR89047.1| putative integrase [Oryza sativa Japonica Group]        67   2e-09
gb|ABB47276.1| retrotransposon protein, putative, unclassified [...    66   3e-09
gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]               66   3e-09

>gb|ABA98071.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1408

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/58 (56%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -1

Query: 257  TKHISIR*YFIREHVEEGNIELHFVSTE-QLADIFTKPLSEGTFTRLVNELGMISGFD 87
            TKHI IR +F+R+HVE+G++EL F+ T+ Q+ADIFTKPL    F  L  ELG+I  FD
Sbjct: 1349 TKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDSNRFAFLRGELGVIHPFD 1406


>gb|ABF97694.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1523

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = -1

Query: 257  TKHISIR*YFIREHVEEGNIELHFVSTE-QLADIFTKPLSEGTFTRLVNELGMISGF 90
            TKH+ IR +F+R+HVE+G++EL F+ T+ Q+ADIFTKPL    FT L  ELG+I  F
Sbjct: 1464 TKHVDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDSNCFTFLCGELGIIHPF 1520


>gb|AAR89047.1| putative integrase [Oryza sativa Japonica Group]
          Length = 1507

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = -1

Query: 257  TKHISIR*YFIREHVEEGNIELHFVSTE-QLADIFTKPLSEGTFTRLVNELGMISGF 90
            TKH+ IR +F+R+HVE+G++EL F+ T+ Q+ADIFTKPL    FT L  ELG+I  F
Sbjct: 1448 TKHVDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDSNCFTFLCGELGIIHPF 1504


>gb|ABB47276.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1062

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = -1

Query: 257  TKHISIR*YFIREHVEEGNIELHFVSTE-QLADIFTKPLSEGTFTRLVNELGMISGF 90
            TKHI IR +F+R+HVE+G++EL F+ T+ QLADIFTKPL    F  L  ELG+I  F
Sbjct: 1003 TKHIDIRFHFLRDHVEKGDVELQFLDTKLQLADIFTKPLDSNRFAFLCGELGIIHPF 1059


>gb|AAL75483.1|AF466202_9 putative pol protein [Zea mays]
          Length = 1553

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/54 (59%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
 Frame = -1

Query: 257  TKHISIR*YFIREHVEEGNIELHFVSTE-QLADIFTKPLSEGTFTRLVNELGMI 99
            TKHI IR +F+R+H ++G+IE+ +VSTE QLADIFTKPL E TF RL +E+ ++
Sbjct: 1494 TKHIDIRHHFLRDHQQKGDIEVFYVSTENQLADIFTKPLDESTFCRLRSEINVL 1547


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