BLASTX nr result

ID: Angelica22_contig00047220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047220
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]   112   3e-23
ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_002511099.1| pentatricopeptide repeat-containing protein,...    95   7e-18
ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13

>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/114 (53%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
 Frame = -2

Query: 335 NVYFIKQTRLFSSQNEDATIG---EITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKN 165
           N  F K     +S +   T+    +I+  LK +NWK  + SSH+P KLNPDVIR+VLH+N
Sbjct: 22  NTKFFKSIEFSTSTSTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQN 81

Query: 164 IHVDPKILLHFFNWSSQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMIST 3
              DPK LL FF WS  QMG PQ L SF ILA+ LC S  F LANGVL QMI T
Sbjct: 82  QVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRT 135


>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/114 (53%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
 Frame = -2

Query: 335 NVYFIKQTRLFSSQNEDATIG---EITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKN 165
           N  F K     +S     T+    +I+  LK +NWK  + SSH+P KLNPDVIR+VLH+N
Sbjct: 20  NTKFFKSIEFSTSTPTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQN 79

Query: 164 IHVDPKILLHFFNWSSQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMIST 3
              DPK LL FF WS  QMG PQ L SF ILA+ LC S  F LANGVL QMI T
Sbjct: 80  QVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRT 133


>ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550214|gb|EEF51701.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1151

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/99 (48%), Positives = 64/99 (64%)
 Frame = -2

Query: 299 SQNEDATIGEITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKNIHVDPKILLHFFNWS 120
           +   D T+ EIT +LK  NW+F +ESS +P KLNPDV+  V+ +N  +DPK L  FFNW 
Sbjct: 38  TNQSDNTVKEITSLLKQKNWQFLIESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWV 97

Query: 119 SQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMIST 3
           + +    QNL +F IL+L+LC S  F  A  VLE+MI T
Sbjct: 98  NSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDT 136


>ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|222868744|gb|EEF05875.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/97 (48%), Positives = 59/97 (60%)
 Frame = -2

Query: 299 SQNEDATIGEITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKNIHVDPKILLHFFNWS 120
           +QN    + EIT  L   NW+  L    V  KL+PDV+ SV+ K ++ DPK LL FFNW 
Sbjct: 35  TQNNSNIVNEITTFLNQKNWESLLPL--VSNKLSPDVVHSVITKQVN-DPKRLLDFFNWV 91

Query: 119 SQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMI 9
             QMG  Q L+SF ILAL+LC S  F  A+ V+ QMI
Sbjct: 92  QFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQMI 128


>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
 Frame = -2

Query: 344 AHKNVYFIKQTRLFSSQNEDATIGEITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKN 165
           +HK   F     L  +QNED+ + EIT +L   NW+  +ESS +P+KLN D+IRSV+ +N
Sbjct: 8   SHKAASFSSSQAL--TQNEDS-VREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQN 64

Query: 164 IHVDPKILLHFFNWSSQQMGT---PQNLKSFLILALVLCKSNKFLLANGVLEQMI 9
              DPK LL+FF WS  +MGT    Q+L     LA+ LC SN +  A+ +++ +I
Sbjct: 65  QVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCII 119


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