BLASTX nr result
ID: Angelica22_contig00047220
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica22_contig00047220 (357 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera] 112 3e-23 ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi... 111 7e-23 ref|XP_002511099.1| pentatricopeptide repeat-containing protein,... 95 7e-18 ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|2... 84 1e-14 ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13 >emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera] Length = 1024 Score = 112 bits (280), Expect = 3e-23 Identities = 61/114 (53%), Positives = 72/114 (63%), Gaps = 3/114 (2%) Frame = -2 Query: 335 NVYFIKQTRLFSSQNEDATIG---EITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKN 165 N F K +S + T+ +I+ LK +NWK + SSH+P KLNPDVIR+VLH+N Sbjct: 22 NTKFFKSIEFSTSTSTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQN 81 Query: 164 IHVDPKILLHFFNWSSQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMIST 3 DPK LL FF WS QMG PQ L SF ILA+ LC S F LANGVL QMI T Sbjct: 82 QVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRT 135 >ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like [Vitis vinifera] Length = 935 Score = 111 bits (277), Expect = 7e-23 Identities = 61/114 (53%), Positives = 71/114 (62%), Gaps = 3/114 (2%) Frame = -2 Query: 335 NVYFIKQTRLFSSQNEDATIG---EITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKN 165 N F K +S T+ +I+ LK +NWK + SSH+P KLNPDVIR+VLH+N Sbjct: 20 NTKFFKSIEFSTSTPTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQN 79 Query: 164 IHVDPKILLHFFNWSSQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMIST 3 DPK LL FF WS QMG PQ L SF ILA+ LC S F LANGVL QMI T Sbjct: 80 QVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRT 133 >ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 1151 Score = 94.7 bits (234), Expect = 7e-18 Identities = 48/99 (48%), Positives = 64/99 (64%) Frame = -2 Query: 299 SQNEDATIGEITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKNIHVDPKILLHFFNWS 120 + D T+ EIT +LK NW+F +ESS +P KLNPDV+ V+ +N +DPK L FFNW Sbjct: 38 TNQSDNTVKEITSLLKQKNWQFLIESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWV 97 Query: 119 SQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMIST 3 + + QNL +F IL+L+LC S F A VLE+MI T Sbjct: 98 NSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDT 136 >ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa] Length = 1041 Score = 84.0 bits (206), Expect = 1e-14 Identities = 47/97 (48%), Positives = 59/97 (60%) Frame = -2 Query: 299 SQNEDATIGEITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKNIHVDPKILLHFFNWS 120 +QN + EIT L NW+ L V KL+PDV+ SV+ K ++ DPK LL FFNW Sbjct: 35 TQNNSNIVNEITTFLNQKNWESLLPL--VSNKLSPDVVHSVITKQVN-DPKRLLDFFNWV 91 Query: 119 SQQMGTPQNLKSFLILALVLCKSNKFLLANGVLEQMI 9 QMG Q L+SF ILAL+LC S F A+ V+ QMI Sbjct: 92 QFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQMI 128 >ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like [Vitis vinifera] Length = 1011 Score = 80.9 bits (198), Expect = 1e-13 Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 3/115 (2%) Frame = -2 Query: 344 AHKNVYFIKQTRLFSSQNEDATIGEITKILKHDNWKFYLESSHVPRKLNPDVIRSVLHKN 165 +HK F L +QNED+ + EIT +L NW+ +ESS +P+KLN D+IRSV+ +N Sbjct: 8 SHKAASFSSSQAL--TQNEDS-VREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQN 64 Query: 164 IHVDPKILLHFFNWSSQQMGT---PQNLKSFLILALVLCKSNKFLLANGVLEQMI 9 DPK LL+FF WS +MGT Q+L LA+ LC SN + A+ +++ +I Sbjct: 65 QVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCII 119