BLASTX nr result

ID: Angelica22_contig00047212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047212
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      70   2e-10
ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...    67   1e-09
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    66   3e-09
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    65   4e-09
ref|XP_004160859.1| PREDICTED: uncharacterized protein LOC101228...    65   6e-09

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = -2

Query: 236  QPPP-SISYQGARSSDPTVTQFVKDRMNTQLLLKDNLIKSQERMKHYADKKKSDREFQTD 60
            QPPP  + Y    SS   V + ++ R     +LK +L+++Q RMK YAD  +S REFQ  
Sbjct: 1362 QPPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFHLLRAQNRMKQYADSHRSQREFQVG 1421

Query: 59   DEVYLKLQPYRQMSVNLK 6
            D VYLKLQPYRQ S+  K
Sbjct: 1422 DFVYLKLQPYRQQSLKTK 1439


>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/77 (42%), Positives = 51/77 (66%)
 Frame = -2

Query: 233 PPPSISYQGARSSDPTVTQFVKDRMNTQLLLKDNLIKSQERMKHYADKKKSDREFQTDDE 54
           PPP I Y   ++++ +V Q +K+R      LK+NL+ +Q RMK  AD ++ + +F+  DE
Sbjct: 498 PPPLILYGDRKTNNNSVEQLLKERDLVISALKENLLTAQNRMKKQADLRRRELKFKVGDE 557

Query: 53  VYLKLQPYRQMSVNLKK 3
           VYLKL+PYRQ S+  K+
Sbjct: 558 VYLKLRPYRQRSLAKKR 574


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/76 (40%), Positives = 50/76 (65%)
 Frame = -2

Query: 233  PPPSISYQGARSSDPTVTQFVKDRMNTQLLLKDNLIKSQERMKHYADKKKSDREFQTDDE 54
            PP  + Y    S    V + +++R +  L LK +L+++Q RMK +AD+ +++REF+  D 
Sbjct: 1308 PPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDY 1367

Query: 53   VYLKLQPYRQMSVNLK 6
            VY+KLQPYRQ SV ++
Sbjct: 1368 VYVKLQPYRQQSVVMR 1383


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/76 (42%), Positives = 49/76 (64%)
 Frame = -2

Query: 233  PPPSISYQGARSSDPTVTQFVKDRMNTQLLLKDNLIKSQERMKHYADKKKSDREFQTDDE 54
            PP  + Y   +S    V + +++R N  L LK +L+++Q RMK +AD+ +++R F   D 
Sbjct: 1279 PPIHLPYLPGKSKVAVVARSLQERENMLLFLKFHLMRAQHRMKQFADQHRTERTFDIGDF 1338

Query: 53   VYLKLQPYRQMSVNLK 6
            VY+KLQPYRQ SV L+
Sbjct: 1339 VYVKLQPYRQQSVVLR 1354


>ref|XP_004160859.1| PREDICTED: uncharacterized protein LOC101228347 [Cucumis sativus]
          Length = 145

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/77 (44%), Positives = 48/77 (62%)
 Frame = -2

Query: 233 PPPSISYQGARSSDPTVTQFVKDRMNTQLLLKDNLIKSQERMKHYADKKKSDREFQTDDE 54
           PPP   Y    + + T+ Q +KDR     +LK++LI +QE+M  YAD K+ D EF   D 
Sbjct: 12  PPPLTYYGDMETPNSTLDQQLKDRDIVLGVLKEHLIIAQEQMNRYADLKRRDMEFGVGDL 71

Query: 53  VYLKLQPYRQMSVNLKK 3
           V+LKL+PYRQ S+  K+
Sbjct: 72  VFLKLRPYRQTSLRKKR 88


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