BLASTX nr result

ID: Angelica22_contig00047164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00047164
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...   131   5e-29
emb|CBI24843.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com...   122   4e-26
ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidops...    98   8e-19

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score =  131 bits (330), Expect = 5e-29
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = -2

Query: 303 ERIMYPEVPIALRMSSHLLLGVVPIYSKQVEYFCQDCNILLIGIRKAFASTDVNLPETAT 124
           ERIM+PEVPIALRMS HLLLGVV IYSK+V+Y  QDCNI+LIGIRKAF+S +VNLPE A+
Sbjct: 42  ERIMFPEVPIALRMSGHLLLGVVRIYSKKVDYLYQDCNIVLIGIRKAFSSIEVNLPEDAS 101

Query: 123 NATFESVTLLDKFQLDGMDLDIDF-SERLQDSHIKDPKEISL 1
           +A F S+TL D F+LD +DLD DF  E   D H++  +EI+L
Sbjct: 102 HAPFHSITLPDTFELDALDLDADFYVEGALDMHLRAQEEITL 143


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  131 bits (330), Expect = 5e-29
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = -2

Query: 303 ERIMYPEVPIALRMSSHLLLGVVPIYSKQVEYFCQDCNILLIGIRKAFASTDVNLPETAT 124
           ERIM+PEVPIALRMS HLLLGVV IYSK+V+Y  QDCNI+LIGIRKAF+S +VNLPE A+
Sbjct: 42  ERIMFPEVPIALRMSGHLLLGVVRIYSKKVDYLYQDCNIVLIGIRKAFSSIEVNLPEDAS 101

Query: 123 NATFESVTLLDKFQLDGMDLDIDF-SERLQDSHIKDPKEISL 1
           +A F S+TL D F+LD +DLD DF  E   D H++  +EI+L
Sbjct: 102 HAPFHSITLPDTFELDALDLDADFYVEGALDMHLRAQEEITL 143


>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 774

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/102 (58%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = -2

Query: 303 ERIMYPEVPIALRMSSHLLLGVVPIYSKQVEYFCQDCNILLIGIRKAFASTDVNLPETAT 124
           +RIM+PEVPIALRMS HLLLGVV IYSK+V++   DCN++L+G+RKAF S +VNLPE AT
Sbjct: 42  DRIMFPEVPIALRMSGHLLLGVVRIYSKKVDFLYHDCNVVLVGLRKAFTSIEVNLPENAT 101

Query: 123 NATFESVTLLDKFQLDGMDLDIDF-SERLQDSHIKDPKEISL 1
            A FESVTL   F LD +D+D D  +    D+H++  +EI+L
Sbjct: 102 TAKFESVTLPPTFDLDALDVDFDIDAYGSPDNHMRSQEEITL 143


>ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|222846910|gb|EEE84457.1|
           predicted protein [Populus trichocarpa]
          Length = 818

 Score =  118 bits (295), Expect = 6e-25
 Identities = 61/106 (57%), Positives = 77/106 (72%), Gaps = 5/106 (4%)
 Frame = -2

Query: 303 ERIMYPEVPIALRMSSHLLLGVVPIYSKQVEYFCQDCNILLIGIRKAFASTDVNLPETAT 124
           +RIM+PEVPIALRMSSHLLLGVV IY K+V+Y  QDC + L G+ KAF +T+VNLPE AT
Sbjct: 42  DRIMFPEVPIALRMSSHLLLGVVRIYKKKVDYLFQDCTVALAGLNKAFTTTEVNLPENAT 101

Query: 123 NATFESVTLLDKFQLDGMDLD--ID---FSERLQDSHIKDPKEISL 1
            ATFES+TL     LDG D+   +D   F  R  D+H+K  +EI++
Sbjct: 102 TATFESITLPPTLNLDGFDMSDYLDPEGFVVRSPDNHLKSYEEITI 147


>gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidopsis thaliana]
          Length = 692

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/101 (51%), Positives = 67/101 (66%)
 Frame = -2

Query: 303 ERIMYPEVPIALRMSSHLLLGVVPIYSKQVEYFCQDCNILLIGIRKAFASTDVNLPETAT 124
           + IM+PEVP+ALR SSHLL+GVV IYSK+V+Y   D N+L   + KAF ST VNLPE A 
Sbjct: 42  DNIMFPEVPLALRTSSHLLVGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDAR 101

Query: 123 NATFESVTLLDKFQLDGMDLDIDFSERLQDSHIKDPKEISL 1
            A  ESVTL     LD  DL+ D  +   D+H +  ++I+L
Sbjct: 102 QAPPESVTLPQALNLDEFDLEDDTLDMEFDNHTRSEEDITL 142


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