BLASTX nr result

ID: Angelica22_contig00046903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00046903
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...    99   3e-19
ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_003623067.1| Pentatricopeptide repeat-containing protein ...    96   3e-18
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...    96   3e-18
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]    94   9e-18

>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
           gi|296089757|emb|CBI39576.3| unnamed protein product
           [Vitis vinifera]
          Length = 586

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/92 (52%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
 Frame = -1

Query: 389 KGFCKVGKAKDGIRILEEMLDKGCLPNKSTYSILVEGLYDSGQEAEVSRVLAIAASSVQG 210
           KGFCKVG A++GIR++EEMLD GCLPNK+TY+IL+EGLY+ G E EV+ VL++ ASS  G
Sbjct: 493 KGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSM-ASSRGG 551

Query: 209 IDTDTWEIIVSR--SFANFDRKEEVIDRLLLD 120
           +D + W + +++  +  N D +   IDR+L++
Sbjct: 552 VDAECWGVFLAKFVNGGNIDVEGAKIDRILVE 583


>ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|222858420|gb|EEE95967.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/90 (48%), Positives = 66/90 (73%)
 Frame = -1

Query: 389 KGFCKVGKAKDGIRILEEMLDKGCLPNKSTYSILVEGLYDSGQEAEVSRVLAIAASSVQG 210
           KGF K G  K+G+RILEEMLD GCLPNKSTY++L+EGL +SG E +V +V+++A +S + 
Sbjct: 410 KGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMAS-RE 468

Query: 209 IDTDTWEIIVSRSFANFDRKEEVIDRLLLD 120
           +D D+W++ + +   N D     +DRLL++
Sbjct: 469 VDADSWDLFLHKIVGNLDCGTGALDRLLME 498


>ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498082|gb|AES79285.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 647

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/114 (45%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
 Frame = -1

Query: 389 KGFCKVGKAKDGIRILEEMLDKGCLPNKSTYSILVEG-LYDSGQEAEVSRVLAIAASSVQ 213
           KGFCKVG AK+GIR+LEEML+  CLPNKSTY+IL++G L   G + E+++V+++A S+  
Sbjct: 444 KGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQEINKVVSLAMST-- 501

Query: 212 GIDTDTWEIIVSRSFANFDRKEEVIDRLLLDHSTE--MSITKD*SLTFRLICWH 57
           G+D D W I V     N +  E  +DR+LL++  E  + I     +TF L  W+
Sbjct: 502 GVDADLWNIFVKPVVGNDNGGEAELDRILLENKAEPALHIFCHCIVTFSLRIWN 555


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/92 (46%), Positives = 67/92 (72%)
 Frame = -1

Query: 389 KGFCKVGKAKDGIRILEEMLDKGCLPNKSTYSILVEGLYDSGQEAEVSRVLAIAASSVQG 210
           KGF K+G AK+GIRILEEMLD  C+PNKSTY+IL+E L   G E EV +V+++A +S  G
Sbjct: 453 KGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMAS-GG 511

Query: 209 IDTDTWEIIVSRSFANFDRKEEVIDRLLLDHS 114
           +D+D+W++ ++++  N DR  + +D    +++
Sbjct: 512 VDSDSWDLFLNKAVGNLDRGSKALDSFFKENA 543


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/73 (57%), Positives = 60/73 (82%)
 Frame = -1

Query: 389 KGFCKVGKAKDGIRILEEMLDKGCLPNKSTYSILVEGLYDSGQEAEVSRVLAIAASSVQG 210
           KGFCKVG A++GIR++EEMLD GCLPNK+TY+IL+EGLY+ G E EV+ VL++ ASS  G
Sbjct: 493 KGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSM-ASSRGG 551

Query: 209 IDTDTWEIIVSRS 171
           +D + W + ++++
Sbjct: 552 VDAECWGVFLAKT 564


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