BLASTX nr result

ID: Angelica22_contig00046629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00046629
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...   115   4e-24
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   112   2e-23
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   112   2e-23
ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
emb|CBI33870.3| unnamed protein product [Vitis vinifera]               99   5e-19

>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Vitis vinifera]
          Length = 372

 Score =  115 bits (288), Expect = 4e-24
 Identities = 65/125 (52%), Positives = 82/125 (65%), Gaps = 12/125 (9%)
 Frame = +1

Query: 61  SGDTSVDADSNFEGRQSQTRSGSEPLNK-SRIPPAGDVQ----------PTNRSKVMAKI 207
           SGDT   ++SN+EGRQSQ+RSGSEP NK SR     D Q          P+NRSK + K+
Sbjct: 44  SGDTP--SNSNYEGRQSQSRSGSEPPNKKSRNSQVVDSQGNVFGRDRDLPSNRSKAIGKM 101

Query: 208 FFKTQLCKRFQAGICPNITNCNFAHSIEDLRSRPPNWQELLASY-XXXXXXXXXXXXFQI 384
           FFKT+LC +F+AG CP +TNCNFAHSI++LR  PPNWQE++A++             FQI
Sbjct: 102 FFKTKLCCKFRAGTCPYVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGVSSEPREEFQI 161

Query: 385 PSHSS 399
           PS  S
Sbjct: 162 PSIGS 166


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 350

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/114 (53%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
 Frame = +1

Query: 58  SSGDTSVDADSN--FEGRQSQTRSGSEPLNKSRIPPAGDVQPTNRSKVMAKIFFKTQLCK 231
           + GD SVD  SN  ++ RQSQ+RSGSEP NK +   + DV  +NRSK + K+FFKT+LC 
Sbjct: 36  NGGDGSVDTPSNSSYDQRQSQSRSGSEPPNK-KSRSSQDVTSSNRSKAIGKMFFKTKLCC 94

Query: 232 RFQAGICPNITNCNFAHSIEDLRSRPPNWQELLASY-XXXXXXXXXXXXFQIPS 390
           +F+AG CP ITNCNFAHSIE+LR  P NWQE++A++             FQIPS
Sbjct: 95  KFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPS 148


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/114 (53%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
 Frame = +1

Query: 58  SSGDTSVDADSN--FEGRQSQTRSGSEPLNKSRIPPAGDVQPTNRSKVMAKIFFKTQLCK 231
           + GD SVD  SN  ++ RQSQ+RSGSEP NK +   + DV  +NRSK + K+FFKT+LC 
Sbjct: 36  NGGDGSVDTPSNSSYDQRQSQSRSGSEPPNK-KSRSSQDVTSSNRSKAIGKMFFKTKLCC 94

Query: 232 RFQAGICPNITNCNFAHSIEDLRSRPPNWQELLASY-XXXXXXXXXXXXFQIPS 390
           +F+AG CP ITNCNFAHSIE+LR  P NWQE++A++             FQIPS
Sbjct: 95  KFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPS 148


>ref|XP_002304341.1| predicted protein [Populus trichocarpa] gi|222841773|gb|EEE79320.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/117 (46%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
 Frame = +1

Query: 55  YSSGDTSVDADSNFEGRQSQTRSGSEPLNKSRIPPAGDVQPTNRSKVMAKIFFKTQLCKR 234
           +++ D   D  S+    QS TRSGSEP NK       + Q  N  K + K+FFKT+LC +
Sbjct: 44  WNNSDILNDNASSNSNYQSSTRSGSEPPNKKS---KNNSQELNSKKSIGKMFFKTKLCCK 100

Query: 235 FQAGICPNITNCNFAHSIEDLRSRPPNWQELLASY-XXXXXXXXXXXXFQIPSHSSF 402
           F+AG CP ITNCNFAHSIE+LR  PPNWQ+++A++             FQIPS   F
Sbjct: 101 FRAGTCPYITNCNFAHSIEELRRPPPNWQDIVAAHEEEKGNTVDVREEFQIPSIVGF 157


>emb|CBI33870.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
 Frame = +1

Query: 61  SGDTSVDADSNFEGRQSQTRSGSEPLNKSRIPPAGDVQPTNRSKVMAKIFFKTQLCKRFQ 240
           SGDT   ++SN+EGRQSQ    S    + R     D+ P+NRSK + K+FFKT+LC +F+
Sbjct: 44  SGDTP--SNSNYEGRQSQ----SNVFGRDR-----DL-PSNRSKAIGKMFFKTKLCCKFR 91

Query: 241 AGICPNITNCNFAHSIEDLRSRPPNWQELLASY-XXXXXXXXXXXXFQIPSHSS 399
           AG CP +TNCNFAHSI++LR  PPNWQE++A++             FQIPS  S
Sbjct: 92  AGTCPYVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGVSSEPREEFQIPSIGS 145


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