BLASTX nr result

ID: Angelica22_contig00046502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00046502
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
ref|XP_002525536.1| pentatricopeptide repeat-containing protein,...    92   3e-17
ref|XP_002468625.1| hypothetical protein SORBIDRAFT_01g049260 [S...    89   5e-16

>ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Vitis vinifera]
          Length = 582

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/99 (51%), Positives = 71/99 (71%)
 Frame = +3

Query: 3   RIQTHVAFVKSYFNAGNCDKALKYVHDLDDQHLQSSNMLYSLVAYLHLKKGHLIIAQSIL 182
           R+ TH AF+K YF++   ++A +YV D    +   SNM+YSL+A LH + G+LI AQ IL
Sbjct: 473 RLTTHAAFIKGYFHSRRYEEAYEYVVDSGVTYKWPSNMIYSLLASLHQRNGNLISAQKIL 532

Query: 183 IQMMDKGLKPNFLVFIKVVKRLQKSCKGSLARDLRSRFS 299
           I+M++KGLKPNF V+ +V++ L KS +  LA DLRSRFS
Sbjct: 533 IEMIEKGLKPNFSVYKRVLEHLDKSGREDLAGDLRSRFS 571


>ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|222862827|gb|EEF00334.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/98 (47%), Positives = 70/98 (71%)
 Frame = +3

Query: 3   RIQTHVAFVKSYFNAGNCDKALKYVHDLDDQHLQSSNMLYSLVAYLHLKKGHLIIAQSIL 182
           R+ TH AF+K +FN+   ++A KYV D D ++  +S M YSL+A LH K+G+L+IAQ+IL
Sbjct: 328 RLSTHAAFIKGFFNSEQYEEAYKYVVDSDKKYKCTSCMNYSLLARLHQKRGNLVIAQNIL 387

Query: 183 IQMMDKGLKPNFLVFIKVVKRLQKSCKGSLARDLRSRF 296
            +M+ KGL+P F V++KV   L KS + +LA DL+ +F
Sbjct: 388 SEMIKKGLRPYFKVYMKVFNCLNKSGRETLATDLQEQF 425


>ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
           gi|449498723|ref|XP_004160616.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 494

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/103 (42%), Positives = 71/103 (68%)
 Frame = +3

Query: 3   RIQTHVAFVKSYFNAGNCDKALKYVHDLDDQHLQSSNMLYSLVAYLHLKKGHLIIAQSIL 182
           R+ TH AFVKSYF++   ++A +Y  D   +++ + N  YSL+A LH K+G+L+ AQ IL
Sbjct: 385 RLSTHAAFVKSYFSSQRYEEAYQYAVDSSLKYVTTQNATYSLLATLHEKRGNLVDAQKIL 444

Query: 183 IQMMDKGLKPNFLVFIKVVKRLQKSCKGSLARDLRSRFSRFTV 311
            ++MD GLKP+F V+ +++K+LQ   +G LA DL+ + S  ++
Sbjct: 445 SELMDAGLKPHFHVYTRLLKKLQVQGRGDLANDLKRKISNVSL 487


>ref|XP_002525536.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535215|gb|EEF36894.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 430

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/103 (47%), Positives = 71/103 (68%)
 Frame = +3

Query: 3   RIQTHVAFVKSYFNAGNCDKALKYVHDLDDQHLQSSNMLYSLVAYLHLKKGHLIIAQSIL 182
           R+ TH AF+K +FN+   +KA KYV   DD++  SSN+ YSL+A LH K+G+L+ A++IL
Sbjct: 328 RLLTHAAFIKGFFNSQQYEKAYKYVVGSDDKY--SSNVNYSLLANLHQKQGNLVDAENIL 385

Query: 183 IQMMDKGLKPNFLVFIKVVKRLQKSCKGSLARDLRSRFSRFTV 311
            +M+ KGL+P+F VF+KV K L KS    LA  L+ +F +  V
Sbjct: 386 SEMIKKGLRPHFNVFMKVKKHLMKSGNEELATSLQKKFLQLEV 428


>ref|XP_002468625.1| hypothetical protein SORBIDRAFT_01g049260 [Sorghum bicolor]
           gi|241922479|gb|EER95623.1| hypothetical protein
           SORBIDRAFT_01g049260 [Sorghum bicolor]
          Length = 422

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/103 (43%), Positives = 63/103 (61%)
 Frame = +3

Query: 3   RIQTHVAFVKSYFNAGNCDKALKYVHDLDDQHLQSSNMLYSLVAYLHLKKGHLIIAQSIL 182
           RI  H AF+K YF AG  + A KYV+D+  +   S N  YSL+A L  K G  + A  +L
Sbjct: 314 RITIHSAFIKGYFYAGRIEDACKYVNDMSTRDRHSVNRNYSLLAKLLRKSGRTVDAGRVL 373

Query: 183 IQMMDKGLKPNFLVFIKVVKRLQKSCKGSLARDLRSRFSRFTV 311
            ++MDKGL+P+   ++KV K L K  +G LA +L+  F RF+V
Sbjct: 374 YELMDKGLRPDHSAYVKVAKDLHKMGRGDLASELKMMFQRFSV 416


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