BLASTX nr result

ID: Angelica22_contig00046499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00046499
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_11072174.1| hypothetical protein B879_04221 [Cecembia lon...    80   2e-13
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      79   3e-13
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 75   5e-12
dbj|BAC05657.1| putatitive retrotransposon Cinful-1 [Oryza sativ...    74   1e-11
ref|XP_002325517.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11

>ref|ZP_11072174.1| hypothetical protein B879_04221 [Cecembia lonarensis LW9]
           gi|405551179|gb|EKB47186.1| hypothetical protein
           B879_04221 [Cecembia lonarensis LW9]
          Length = 145

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/88 (46%), Positives = 57/88 (64%)
 Frame = +1

Query: 1   RTTARSSTGETAFRLAFGTDALLSVEVGLDSYRTQVFNVVTNEFGLRANVDLLEEEREAA 180
           R + R+STGET F LAFGT+A++ VE+   ++R Q +    N+  L  N+DL+EE    A
Sbjct: 58  RNSYRTSTGETPFLLAFGTEAVVPVELEQATFRVQNYVQSENDKQLTLNLDLVEEHINQA 117

Query: 181 HQRNVRYQLQAAQYYDSGVKKRSFSIGD 264
           H RNV Y+ + + YYDS VK  SF +GD
Sbjct: 118 HLRNVAYKQRISNYYDSRVKPHSFKVGD 145


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/93 (41%), Positives = 60/93 (64%)
 Frame = +1

Query: 1    RTTARSSTGETAFRLAFGTDALLSVEVGLDSYRTQVFNVVTNEFGLRANVDLLEEEREAA 180
            RTT + +TG + F L +G++A+L +E  + ++RT  FN V NE GL+A++DL+EE R+ A
Sbjct: 1159 RTTEKEATGYSPFHLVYGSEAVLPIEAVVPTFRTATFNPVENEEGLKASLDLVEESRDTA 1218

Query: 181  HQRNVRYQLQAAQYYDSGVKKRSFSIGDLVLRE 279
                  YQ +  + Y+  V KR   +GDLVLR+
Sbjct: 1219 RLNLAVYQNRMRRAYNHRVHKRDLRVGDLVLRK 1251


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/94 (41%), Positives = 57/94 (60%)
 Frame = +1

Query: 1    RTTARSSTGETAFRLAFGTDALLSVEVGLDSYRTQVFNVVTNEFGLRANVDLLEEEREAA 180
            RTT R STGET F + +G +A++ +E+G  + +   +N VTN   L  +++ +EE RE A
Sbjct: 958  RTTPRRSTGETPFSMTYGMEAVIPLELGFPTLKFDQYNNVTNHDMLHDSLNTIEERREVA 1017

Query: 181  HQRNVRYQLQAAQYYDSGVKKRSFSIGDLVLREL 282
              +   YQ +  Q YD GVK R    GDLVLR++
Sbjct: 1018 SVKMGSYQQKLKQAYDKGVKSRPLVPGDLVLRKV 1051


>dbj|BAC05657.1| putatitive retrotransposon Cinful-1 [Oryza sativa Japonica Group]
          Length = 1739

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/94 (43%), Positives = 54/94 (57%)
 Frame = +1

Query: 1    RTTARSSTGETAFRLAFGTDALLSVEVGLDSYRTQVFNVVTNEFGLRANVDLLEEEREAA 180
            RTT   +TGET F L +G +A+LS E+ L S R  ++N  T +     N+D LEE R  A
Sbjct: 1549 RTTPSHATGETPFFLVYGAEAVLSSELSLGSPRIALYNEATQDDLRHDNLDYLEERRRRA 1608

Query: 181  HQRNVRYQLQAAQYYDSGVKKRSFSIGDLVLREL 282
              R  RYQ    +Y+   V+ RS  IGDLVLR +
Sbjct: 1609 ALRAARYQQSLRRYHQRHVRARSLQIGDLVLRRV 1642


>ref|XP_002325517.1| predicted protein [Populus trichocarpa] gi|222862392|gb|EEE99898.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/84 (45%), Positives = 54/84 (64%)
 Frame = +1

Query: 1   RTTARSSTGETAFRLAFGTDALLSVEVGLDSYRTQVFNVVTNEFGLRANVDLLEEEREAA 180
           RTT  +STGET F L +G +A++ VE+G  S +   F+   NE GL+ N+DLLEE R  A
Sbjct: 145 RTTTNTSTGETPFLLTYGIEAMILVEIGCPSAKVLHFSSQNNEQGLKVNLDLLEESRFTA 204

Query: 181 HQRNVRYQLQAAQYYDSGVKKRSF 252
             RN  Y+ +A QY+++ VK  +F
Sbjct: 205 AIRNEAYRHEATQYHNTRVKNITF 228


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