BLASTX nr result

ID: Angelica22_contig00046332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00046332
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                 92   6e-17
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...    92   6e-17
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      77   2e-12
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                77   2e-12
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              75   4e-12

>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/84 (55%), Positives = 60/84 (71%)
 Frame = -1

Query: 263 ETPFSLTYGCEAMVPVEVGSGSFIREHYDPELNEVNHRLYLDMIEESRNEAQLRLAAYQR 84
           ++PFSL +G EA+VP+EVG  SF  +HYDPE+NE   R  LD + E R +A L+LAA + 
Sbjct: 625 KSPFSLAFGAEAVVPIEVGLPSFRVQHYDPEVNEQLMREALDQLPEMRLQAALKLAAQKN 684

Query: 83  RTARYYNGKVRARPLHVGDLVLRR 12
           R +R YN +VR RPL  GDLVLRR
Sbjct: 685 RMSRIYNRRVRHRPLTEGDLVLRR 708


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/84 (55%), Positives = 60/84 (71%)
 Frame = -1

Query: 263 ETPFSLTYGCEAMVPVEVGSGSFIREHYDPELNEVNHRLYLDMIEESRNEAQLRLAAYQR 84
           ++PFSL +G EA+VP+EVG  SF  +HYDPE+NE   R  LD + E R +A L+LAA + 
Sbjct: 625 KSPFSLAFGAEAVVPIEVGLPSFRVQHYDPEVNEQLMREALDQLPEMRLQAALKLAAQKN 684

Query: 83  RTARYYNGKVRARPLHVGDLVLRR 12
           R +R YN +VR RPL  GDLVLRR
Sbjct: 685 RMSRIYNRRVRHRPLTEGDLVLRR 708


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/83 (46%), Positives = 53/83 (63%)
 Frame = -1

Query: 260  TPFSLTYGCEAMVPVEVGSGSFIREHYDPELNEVNHRLYLDMIEESRNEAQLRLAAYQRR 81
            +PF L YG EA++P+E    +F    ++P  NE   +  LD++EESR+ A+L LA YQ R
Sbjct: 1169 SPFHLVYGSEAVLPIEAVVPTFRTATFNPVENEEGLKASLDLVEESRDTARLNLAVYQNR 1228

Query: 80   TARYYNGKVRARPLHVGDLVLRR 12
              R YN +V  R L VGDLVLR+
Sbjct: 1229 MRRAYNHRVHKRDLRVGDLVLRK 1251


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/83 (48%), Positives = 55/83 (66%)
 Frame = -1

Query: 263  ETPFSLTYGCEAMVPVEVGSGSFIREHYDPELNEVNHRLYLDMIEESRNEAQLRLAAYQR 84
            ETP+SLTYG EAM+PVE+G  S  R+  D +LN+ +  + LD+I E R++ ++R  A + 
Sbjct: 1722 ETPYSLTYGTEAMIPVEIGEPSLRRQTLDLDLNKESLLVGLDLINELRDKCKIREEACKI 1781

Query: 83   RTARYYNGKVRARPLHVGDLVLR 15
            R AR YN KV+ R    GDLV R
Sbjct: 1782 RAARRYNSKVKPRSYQKGDLVWR 1804


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = -1

Query: 263  ETPFSLTYGCEAMVPVEVGSGSFIREH--YDPELNEVNHRLYLDMIEESRNEAQLRLAAY 90
            ETPFSL YG EA+VP E+      R     + E N       LD I E R++A +R+  Y
Sbjct: 962  ETPFSLVYGMEAVVPAELNVPGLRRTEAPLNEEENSAMLNDSLDTINERRDQALIRIQNY 1021

Query: 89   QRRTARYYNGKVRARPLHVGDLVLRRV 9
            Q+  ARYYN KV++RP  VGD VLRRV
Sbjct: 1022 QQAAARYYNSKVKSRPFFVGDYVLRRV 1048


Top