BLASTX nr result

ID: Angelica22_contig00046166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00046166
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Viti...    81   1e-13
dbj|BAB84581.1| transcription factor LIM [Populus kitakamiensis]       81   1e-13
ref|XP_002320687.1| predicted protein [Populus trichocarpa] gi|1...    80   2e-13
ref|XP_002302405.1| predicted protein [Populus trichocarpa] gi|1...    80   2e-13
gb|ABK58467.1| LIM domain protein WLIM1a [Populus tremula x Popu...    80   2e-13

>ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
           gi|147785329|emb|CAN72849.1| hypothetical protein
           VITISV_013939 [Vitis vinifera]
           gi|302142193|emb|CBI19396.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = +1

Query: 250 KCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEGTDEQ 387
           KC HGGCTIS +NY++H+G+ YCK+HHTQLIKEKGNLSQLEG  E+
Sbjct: 136 KCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGDHEK 181


>dbj|BAB84581.1| transcription factor LIM [Populus kitakamiensis]
          Length = 197

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = +1

Query: 250 KCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEGTDEQPPSS 399
           KCIHGGCTIS +NY++H+G+ YCK+HH QLIKEKGNLSQLEG  E+   S
Sbjct: 136 KCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDIEKDSMS 185


>ref|XP_002320687.1| predicted protein [Populus trichocarpa] gi|18565116|dbj|BAB84582.1|
           transcription factor LIM [Populus kitakamiensis]
           gi|222861460|gb|EEE99002.1| predicted protein [Populus
           trichocarpa] gi|225626277|gb|ACN97188.1| LIM
           transcription factor [Populus trichocarpa]
           gi|254047524|gb|ACT64134.1| transcription factor Lim1
           [Populus deltoides] gi|254047526|gb|ACT64135.1|
           transcription factor Lim1 [Populus deltoides]
          Length = 197

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = +1

Query: 250 KCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEGTDEQ 387
           KCIHGGCTIS +NY++H+G+ YCK+HH QLIKEKGNLSQLEG  E+
Sbjct: 136 KCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDIEK 181


>ref|XP_002302405.1| predicted protein [Populus trichocarpa] gi|118483298|gb|ABK93551.1|
           unknown [Populus trichocarpa]
           gi|222844131|gb|EEE81678.1| predicted protein [Populus
           trichocarpa] gi|225626275|gb|ACN97187.1| LIM
           transcription factor [Populus trichocarpa]
          Length = 197

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = +1

Query: 250 KCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEGTDEQ 387
           KCIHGGCTIS +NY++H+G+ YCK+HH QLIKEKGNLSQLEG  E+
Sbjct: 136 KCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDVEK 181


>gb|ABK58467.1| LIM domain protein WLIM1a [Populus tremula x Populus alba]
          Length = 197

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = +1

Query: 250 KCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEGTDEQ 387
           KCIHGGCTIS +NY++H+G+ YCK+HH QLIKEKGNLSQLEG  E+
Sbjct: 136 KCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEGDIEK 181


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