BLASTX nr result

ID: Angelica22_contig00046140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00046140
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medica...   118   4e-25
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]   100   1e-19
ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...    60   5e-17
ref|XP_002324026.1| predicted protein [Populus trichocarpa] gi|2...    55   3e-16
ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|2...    53   4e-14

>ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477313|gb|AES58516.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 346

 Score =  118 bits (296), Expect = 4e-25
 Identities = 73/137 (53%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   GRSRFWRGRILLGETERKKGRGATMHGTSRPCLRGTVERATHECCRVGRANNSNAFGLFL 180
           GRSRF     L G  +R++ R    H  SRPCLRGTVERATHECCRVGRANNSNAFGLF 
Sbjct: 223 GRSRFLAEPYLAG-WDREQERTGGNHACSRPCLRGTVERATHECCRVGRANNSNAFGLFF 281

Query: 181 SKNHGVTLSSP*YGLQVLMAEHEEIDHQYDYDGNGNQKHDWGLRGPQDNKTISN-SNVSM 357
            +     L+               I     Y+            G QDN+TISN SNVSM
Sbjct: 282 EQESQRYLT------------FTMIRTPSSYEARPT--------GVQDNQTISNSSNVSM 321

Query: 358 RLFGSTGEPDGRGGGIW 408
           RLFGSTGEPDGRG GIW
Sbjct: 322 RLFGSTGEPDGRGDGIW 338


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = -3

Query: 154 YWLVRPGSIHESLVQLSLGDTVEKYHAWLPPVLSFSRSHPARYGPAK 14
           YWLVRPGSIHESLVQLSLGDTVEKYHAWLPPVLSFSRSHPARYG AK
Sbjct: 250 YWLVRPGSIHESLVQLSLGDTVEKYHAWLPPVLSFSRSHPARYGSAK 296



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = -1

Query: 408 PDSTAAAIWFTGTTKKSHAYVTVTDGFIIL 319
           PDS AAAIWFTGTTKKSHAYVTVTDGFIIL
Sbjct: 205 PDSIAAAIWFTGTTKKSHAYVTVTDGFIIL 234


>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 60.5 bits (145), Expect(2) = 5e-17
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = -1

Query: 408 PDSTAAAIWFTGTTKKSHAYVTVTDGFIIL 319
           PDS AAAIWFTGTTKKSHAYVTVTDG IIL
Sbjct: 207 PDSIAAAIWFTGTTKKSHAYVTVTDGLIIL 236



 Score = 52.0 bits (123), Expect(2) = 5e-17
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -3

Query: 322 LVDHEDPSRASGFHSHHNHIDDQSPRALP 236
           ++DHEDP RASGFHSH  HIDD+SPRALP
Sbjct: 235 ILDHEDPGRASGFHSH--HIDDKSPRALP 261


>ref|XP_002324026.1| predicted protein [Populus trichocarpa] gi|222867028|gb|EEF04159.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 55.5 bits (132), Expect(2) = 3e-16
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +1

Query: 229 VLMAEHEEIDHQYDYDGNGNQKHDWGLRGPQ 321
           +LMAEHEEI HQYD DGNGNQKHD GLRGP+
Sbjct: 30  LLMAEHEEIYHQYD-DGNGNQKHDRGLRGPR 59



 Score = 54.3 bits (129), Expect(2) = 3e-16
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +2

Query: 77  MVLLDRVSEGQLNERLMNAAGSDEPITRT 163
           MVLLD VSEGQLNER MNA GSDEPITRT
Sbjct: 1   MVLLDHVSEGQLNERFMNAVGSDEPITRT 29


>ref|XP_002322005.1| predicted protein [Populus trichocarpa] gi|222869001|gb|EEF06132.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 52.8 bits (125), Expect(2) = 4e-14
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = -1

Query: 405 DSTAAAIWFTGTTKKSHAYVTVTDGFIIL 319
           DS AAA+WFT TTKKSHAYVTV DG IIL
Sbjct: 49  DSIAAAVWFTSTTKKSHAYVTVIDGLIIL 77



 Score = 50.1 bits (118), Expect(2) = 4e-14
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -3

Query: 322 LVDHEDPSRASGFHSHHNHIDDQSPRALP 236
           ++DHEDP RASGFHSHH HID +SPRA P
Sbjct: 76  ILDHEDPGRASGFHSHH-HIDGKSPRAPP 103


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