BLASTX nr result

ID: Angelica22_contig00045877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045877
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   323   2e-86
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   323   2e-86
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   320   2e-85
emb|CBI22140.3| unnamed protein product [Vitis vinifera]              320   2e-85
ref|XP_003634255.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   303   3e-80

>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  323 bits (827), Expect = 2e-86
 Identities = 154/224 (68%), Positives = 192/224 (85%)
 Frame = +3

Query: 6   GDIDEAYSLFEKMPERNTASWNAIIGGYVKCGKIELARAFYDLMPKRNNVSCITMISGYS 185
           GD+++A SLF++MPERN ASWNA+I GYV+ G I+ AR+F+D MP+RNNVS +TMISGYS
Sbjct: 219 GDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQRNNVSWMTMISGYS 278

Query: 186 RCGNVESAKELFYQMDEKDQVVYNAMIACFAQNSRPQEALQLFNEMIQPHIKIQPDKMTL 365
           +CG+V+SA ELF Q+  KD +++NAMIAC+AQNSRP+EAL+LFN M+ P + +QPD+MTL
Sbjct: 279 KCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTL 338

Query: 366 SSVISACSQLGDLSFGVWTESFMRKLEIRMDDHLATAFIDLYAKSGSIDKAFELFRGLRK 545
           +SVISACSQLGDL FG W ES+MR+L I MD HLATA +DLYAK GSIDKA+ELF GLRK
Sbjct: 339 ASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRK 398

Query: 546 KDVVAYTAMILGCGINGRDSDAIKLFEEMIHSEISPNLVTFTGL 677
           KD+VAYTAMILGCGING+  DAIKLF+EM+ ++I PN +TF GL
Sbjct: 399 KDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGL 442



 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 59/193 (30%), Positives = 108/193 (55%)
 Frame = +3

Query: 72  AIIGGYVKCGKIELARAFYDLMPKRNNVSCITMISGYSRCGNVESAKELFYQMDEKDQVV 251
           A++  Y K G +E+AR  +D M +RN VS  +M++GY + G++  A+ +F ++ +KD + 
Sbjct: 148 ALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVIS 207

Query: 252 YNAMIACFAQNSRPQEALQLFNEMIQPHIKIQPDKMTLSSVISACSQLGDLSFGVWTESF 431
           +N+MI+ +A+    ++AL LF +M + +        + +++IS   + GD+       SF
Sbjct: 208 WNSMISGYARAGDMEKALSLFQQMPERNF------ASWNAMISGYVEFGDIDS---ARSF 258

Query: 432 MRKLEIRMDDHLATAFIDLYAKSGSIDKAFELFRGLRKKDVVAYTAMILGCGINGRDSDA 611
              +  R +    T  I  Y+K G +D A ELF  +  KD++ + AMI     N R  +A
Sbjct: 259 FDAMPQRNNVSWMT-MISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEA 317

Query: 612 IKLFEEMIHSEIS 650
           +KLF  M++ +++
Sbjct: 318 LKLFNNMLNPDVN 330


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  323 bits (827), Expect = 2e-86
 Identities = 154/224 (68%), Positives = 192/224 (85%)
 Frame = +3

Query: 6   GDIDEAYSLFEKMPERNTASWNAIIGGYVKCGKIELARAFYDLMPKRNNVSCITMISGYS 185
           GD+++A SLF++MPERN ASWNA+I GYV+ G I+ AR+F+D MP+ NNVS +TMISGYS
Sbjct: 215 GDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQXNNVSWMTMISGYS 274

Query: 186 RCGNVESAKELFYQMDEKDQVVYNAMIACFAQNSRPQEALQLFNEMIQPHIKIQPDKMTL 365
           +CG+V+SA ELF Q+  KD +++NAMIAC+AQNSRP+EAL+LFN M+ P + +QPD+MTL
Sbjct: 275 KCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTL 334

Query: 366 SSVISACSQLGDLSFGVWTESFMRKLEIRMDDHLATAFIDLYAKSGSIDKAFELFRGLRK 545
           +SVISACSQLGDL FG W ES+MR+L I MD HLATA +DLYAK GSIDKA+ELF GLRK
Sbjct: 335 ASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRK 394

Query: 546 KDVVAYTAMILGCGINGRDSDAIKLFEEMIHSEISPNLVTFTGL 677
           KD+VAYTAMILGCGING+  DAIKLF+EM+ ++I PNL+TF GL
Sbjct: 395 KDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNLITFIGL 438



 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 57/193 (29%), Positives = 108/193 (55%)
 Frame = +3

Query: 72  AIIGGYVKCGKIELARAFYDLMPKRNNVSCITMISGYSRCGNVESAKELFYQMDEKDQVV 251
           A++  Y K G +E+AR  +D M +RN VS  +M++GY + G++  A+ +F ++ +KD + 
Sbjct: 144 ALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVIS 203

Query: 252 YNAMIACFAQNSRPQEALQLFNEMIQPHIKIQPDKMTLSSVISACSQLGDLSFGVWTESF 431
           +N+MI+ +A+    ++AL LF +M + +        + +++IS   + GD+       SF
Sbjct: 204 WNSMISGYARAGDMEKALSLFQQMPERNF------ASWNAMISGYVEFGDIDS---ARSF 254

Query: 432 MRKLEIRMDDHLATAFIDLYAKSGSIDKAFELFRGLRKKDVVAYTAMILGCGINGRDSDA 611
              +  + ++      I  Y+K G +D A ELF  +  KD++ + AMI     N R  +A
Sbjct: 255 FDAMP-QXNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEA 313

Query: 612 IKLFEEMIHSEIS 650
           +KLF  M++ +++
Sbjct: 314 LKLFNNMLNPDVN 326


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  320 bits (819), Expect = 2e-85
 Identities = 152/224 (67%), Positives = 191/224 (85%)
 Frame = +3

Query: 6   GDIDEAYSLFEKMPERNTASWNAIIGGYVKCGKIELARAFYDLMPKRNNVSCITMISGYS 185
           GD+++A SLF++MPERN ASWNA+I G+V+ G I+ AR+F+D MP++NNVS +TMISGYS
Sbjct: 219 GDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYS 278

Query: 186 RCGNVESAKELFYQMDEKDQVVYNAMIACFAQNSRPQEALQLFNEMIQPHIKIQPDKMTL 365
           +CG+V+SA ELF Q+  KD +++NAMIAC+AQNSRP EAL LFN M+ P++ +QPD+MTL
Sbjct: 279 KCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTL 338

Query: 366 SSVISACSQLGDLSFGVWTESFMRKLEIRMDDHLATAFIDLYAKSGSIDKAFELFRGLRK 545
           +SVISACSQLGDL FG W ES+MR+L I MD HLATA +DLYAK GSIDKA+ELF GLRK
Sbjct: 339 ASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRK 398

Query: 546 KDVVAYTAMILGCGINGRDSDAIKLFEEMIHSEISPNLVTFTGL 677
           KD+VAYTAMILGCGING+  DAIKLF+EM+ ++I PN +TF GL
Sbjct: 399 KDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGL 442



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 56/193 (29%), Positives = 106/193 (54%)
 Frame = +3

Query: 72  AIIGGYVKCGKIELARAFYDLMPKRNNVSCITMISGYSRCGNVESAKELFYQMDEKDQVV 251
           A++  Y K G +E+AR  +D M +RN VS  +M++GY + G++  A+ +F ++ +KD + 
Sbjct: 148 ALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVIS 207

Query: 252 YNAMIACFAQNSRPQEALQLFNEMIQPHIKIQPDKMTLSSVISACSQLGDLSFGVWTESF 431
           +N+MI+ +A+    ++A  LF +M + +        + +++IS   + GD+       SF
Sbjct: 208 WNSMISGYARAGDMEKASSLFQQMPERNF------ASWNAMISGHVEFGDIDS---ARSF 258

Query: 432 MRKLEIRMDDHLATAFIDLYAKSGSIDKAFELFRGLRKKDVVAYTAMILGCGINGRDSDA 611
              +  + +    T  I  Y+K G +D A ELF  +  KD++ + AMI     N R ++A
Sbjct: 259 FDAMPQKNNVSWMT-MISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEA 317

Query: 612 IKLFEEMIHSEIS 650
           + LF  M++  ++
Sbjct: 318 LNLFNNMLNPYVN 330


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  320 bits (819), Expect = 2e-85
 Identities = 152/224 (67%), Positives = 191/224 (85%)
 Frame = +3

Query: 6   GDIDEAYSLFEKMPERNTASWNAIIGGYVKCGKIELARAFYDLMPKRNNVSCITMISGYS 185
           GD+++A SLF++MPERN ASWNA+I G+V+ G I+ AR+F+D MP++NNVS +TMISGYS
Sbjct: 67  GDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYS 126

Query: 186 RCGNVESAKELFYQMDEKDQVVYNAMIACFAQNSRPQEALQLFNEMIQPHIKIQPDKMTL 365
           +CG+V+SA ELF Q+  KD +++NAMIAC+AQNSRP EAL LFN M+ P++ +QPD+MTL
Sbjct: 127 KCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTL 186

Query: 366 SSVISACSQLGDLSFGVWTESFMRKLEIRMDDHLATAFIDLYAKSGSIDKAFELFRGLRK 545
           +SVISACSQLGDL FG W ES+MR+L I MD HLATA +DLYAK GSIDKA+ELF GLRK
Sbjct: 187 ASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRK 246

Query: 546 KDVVAYTAMILGCGINGRDSDAIKLFEEMIHSEISPNLVTFTGL 677
           KD+VAYTAMILGCGING+  DAIKLF+EM+ ++I PN +TF GL
Sbjct: 247 KDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGL 290


>ref|XP_003634255.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g22760-like [Vitis vinifera]
          Length = 583

 Score =  303 bits (775), Expect = 3e-80
 Identities = 142/225 (63%), Positives = 187/225 (83%)
 Frame = +3

Query: 3   TGDIDEAYSLFEKMPERNTASWNAIIGGYVKCGKIELARAFYDLMPKRNNVSCITMISGY 182
           +GD+++A SLF++MPERN ASWNA+I GYV+ G +E AR+F+D MP+RN+ S +TMISGY
Sbjct: 200 SGDLEKASSLFQQMPERNFASWNAMINGYVEFGDLESARSFFDAMPQRNSASWMTMISGY 259

Query: 183 SRCGNVESAKELFYQMDEKDQVVYNAMIACFAQNSRPQEALQLFNEMIQPHIKIQPDKMT 362
           S+CG+V+SA ELF Q+  KD +++NA+IAC+AQNS+ +EAL+LFN M+ P++ +QPD+MT
Sbjct: 260 SKCGDVDSACELFDQVGGKDLLLFNAVIACYAQNSKLKEALKLFNMMLHPNVNVQPDEMT 319

Query: 363 LSSVISACSQLGDLSFGVWTESFMRKLEIRMDDHLATAFIDLYAKSGSIDKAFELFRGLR 542
           L+SVIS CSQ GD  FG W ES+MR+L + MD  L TA +DLYA  GSIDKA+ELF GLR
Sbjct: 320 LASVISPCSQFGDFRFGPWIESYMRRLGVEMDGRLGTALLDLYAXCGSIDKAYELFHGLR 379

Query: 543 KKDVVAYTAMILGCGINGRDSDAIKLFEEMIHSEISPNLVTFTGL 677
           KKD+VAYTAMILGCG+NG+  DAIKLF+EM+ ++I PNL+ FTGL
Sbjct: 380 KKDLVAYTAMILGCGMNGKAIDAIKLFDEMVDAQICPNLIMFTGL 424



 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 53/215 (24%), Positives = 100/215 (46%)
 Frame = +3

Query: 6   GDIDEAYSLFEKMPERNTASWNAIIGGYVKCGKIELARAFYDLMPKRNNVSCITMISGYS 185
           GD++ +  +F++        W++++ G +K G + +A+  +D +P+++ +S  +M S Y+
Sbjct: 145 GDMEISSKMFDEX------GWHSMLAGCLKSGDLAVAQRVFDEIPQKDVISWNSMFSXYA 198

Query: 186 RCGNVESAKELFYQMDEKDQVVYNAMIACFAQNSRPQEALQLFNEMIQPHIKIQPDKMTL 365
           R G++E A  LF QM E++   +NAMI  + +    + A   F+ M Q +          
Sbjct: 199 RSGDLEKASSLFQQMPERNFASWNAMINGYVEFGDLESARSFFDAMPQRN---------- 248

Query: 366 SSVISACSQLGDLSFGVWTESFMRKLEIRMDDHLATAFIDLYAKSGSIDKAFELFRGLRK 545
                             + S+M               I  Y+K G +D A ELF  +  
Sbjct: 249 ------------------SASWM-------------TMISGYSKCGDVDSACELFDQVGG 277

Query: 546 KDVVAYTAMILGCGINGRDSDAIKLFEEMIHSEIS 650
           KD++ + A+I     N +  +A+KLF  M+H  ++
Sbjct: 278 KDLLLFNAVIACYAQNSKLKEALKLFNMMLHPNVN 312


Top