BLASTX nr result

ID: Angelica22_contig00045840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045840
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-lik...    68   7e-10
emb|CBI18988.3| unnamed protein product [Vitis vinifera]               68   7e-10
emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera]    68   7e-10
ref|XP_002520335.1| DNA binding protein, putative [Ricinus commu...    59   5e-07
ref|XP_004161161.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF comp...    58   9e-07

>ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-like [Vitis vinifera]
          Length = 771

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -1

Query: 348 PAMFYNNAGNTRPQTISDVPSQPYVSS-SNNQLVHPHVSPMMSQQPTYGLGPRLPLSAIN 172
           PA+  NN GN R Q IS  PSQP +S   NNQ +HPH+S  M +QP +  GPRLPL+AI 
Sbjct: 697 PALVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMS-FMPRQPMFSFGPRLPLAAIQ 755

Query: 171 PYPEFPN 151
           P    P+
Sbjct: 756 PSSSTPS 762


>emb|CBI18988.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -1

Query: 348 PAMFYNNAGNTRPQTISDVPSQPYVSS-SNNQLVHPHVSPMMSQQPTYGLGPRLPLSAIN 172
           PA+  NN GN R Q IS  PSQP +S   NNQ +HPH+S  M +QP +  GPRLPL+AI 
Sbjct: 579 PALVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMS-FMPRQPMFSFGPRLPLAAIQ 637

Query: 171 PYPEFPN 151
           P    P+
Sbjct: 638 PSSSTPS 644


>emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera]
          Length = 334

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -1

Query: 348 PAMFYNNAGNTRPQTISDVPSQPYVSS-SNNQLVHPHVSPMMSQQPTYGLGPRLPLSAIN 172
           PA+  NN GN R Q IS  PSQP +S   NNQ +HPH+S  M +QP +  GPRLPL+AI 
Sbjct: 238 PALVSNNTGNNRQQIISASPSQPSISGYGNNQQMHPHMS-FMPRQPMFSFGPRLPLAAIQ 296

Query: 171 PYPEFPN 151
           P    P+
Sbjct: 297 PSSSTPS 303


>ref|XP_002520335.1| DNA binding protein, putative [Ricinus communis]
           gi|223540554|gb|EEF42121.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = -1

Query: 348 PAMFYNNAGNTRPQTISDVPSQPYVSS-SNNQLVHPHVSPMM--SQQPTYGLGPRLPLSA 178
           P+M  NN G++R Q +    SQP +S   NNQ VHPH+S M     QP + +GPRLPL+A
Sbjct: 674 PSMGNNNIGSSRQQVMPTSSSQPSISGYGNNQQVHPHMSFMQRGQPQPMFPVGPRLPLAA 733

Query: 177 INPYPEFPN 151
           I P    P+
Sbjct: 734 IQPSSSAPS 742


>ref|XP_004161161.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3C-like
           [Cucumis sativus]
          Length = 779

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
 Frame = -1

Query: 348 PAMFYNNAG-NTRPQTISDVPSQPYVS--SSNNQLVHPHVSPMMSQQPTYGLGPRLPLSA 178
           P+M  NN+  N+RP  IS   SQP VS  S+N Q +HPH+S  M +QP +GLG RLPLSA
Sbjct: 675 PSMVVNNSNTNSRPNMISPPASQPSVSGYSNNQQPLHPHMS-YMPRQPMFGLGQRLPLSA 733

Query: 177 I 175
           I
Sbjct: 734 I 734


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