BLASTX nr result
ID: Angelica22_contig00045837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00045837
(346 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2... 188 5e-46
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi... 179 3e-43
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab... 177 8e-43
ref|XP_002520500.1| pentatricopeptide repeat-containing protein,... 176 2e-42
ref|NP_190263.1| pentatricopeptide repeat-containing protein [Ar... 176 2e-42
>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
predicted protein [Populus trichocarpa]
Length = 650
Score = 188 bits (477), Expect = 5e-46
Identities = 87/115 (75%), Positives = 105/115 (91%)
Frame = +1
Query: 1 LVPYSVTMVSVIQACTALCAVEQGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGR 180
L P SVTMVSV+QAC AL A+EQGRL+HGY+LRKGLDSILPV++ALV+MYARCG L++G+
Sbjct: 274 LCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQ 333
Query: 181 RVFDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEMLFNGIHPSSVSFVSVLGA 345
RVFDQM++RDVVSWNS+ISSYG+HG GKKAI +FEEM +NG+ PS +SFVSVLGA
Sbjct: 334 RVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGA 388
Score = 75.9 bits (185), Expect = 3e-12
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 TMVSVIQACTA----LCAVEQGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGRRV 186
T V++AC A + + +GR +H ++LR G D + ++ LV MYA+ G + V
Sbjct: 173 TYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCV 232
Query: 187 FDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEMLF--NGIHPSSVSFVSVLGA 345
F+QM ++VVSW++MI+ Y +G +A+E+F E++ + P+SV+ VSVL A
Sbjct: 233 FNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQA 287
>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 179 bits (453), Expect = 3e-43
Identities = 82/115 (71%), Positives = 106/115 (92%)
Frame = +1
Query: 1 LVPYSVTMVSVIQACTALCAVEQGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGR 180
L+P SVTMVSV+QAC AL A+EQG+L+HGY+LR+GLDSILPVV+ALV++YARCG+L++G
Sbjct: 282 LLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGH 341
Query: 181 RVFDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEMLFNGIHPSSVSFVSVLGA 345
RVF++ME+RDVVSWNS+ISSYGIHG G+KAI++F+EM+ G+ PS +SFVSVLGA
Sbjct: 342 RVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGA 396
Score = 77.8 bits (190), Expect = 9e-13
Identities = 44/115 (38%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 TMVSVIQACTA----LCAVEQGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGRRV 186
T V++AC A + + GR +HG++LR G + + ++ L+ MYAR G + RV
Sbjct: 181 TYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRV 240
Query: 187 FDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEMLFNG--IHPSSVSFVSVLGA 345
FDQM ++VVSW++MI+ Y +G +A+E+F +M+ + P+SV+ VSVL A
Sbjct: 241 FDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQA 295
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/113 (25%), Positives = 58/113 (51%)
Frame = +1
Query: 7 PYSVTMVSVIQACTALCAVEQGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGRRV 186
P T +I +CT ++ QG LH +++ G D + L++MY+ +D R+V
Sbjct: 76 PTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKV 135
Query: 187 FDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEMLFNGIHPSSVSFVSVLGA 345
FD+ +R + WN++ + + G G++ ++++ M G+ ++ VL A
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKA 188
>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
Length = 657
Score = 177 bits (449), Expect = 8e-43
Identities = 82/113 (72%), Positives = 101/113 (89%)
Frame = +1
Query: 7 PYSVTMVSVIQACTALCAVEQGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGRRV 186
P SVTMVSV+QAC +L A+EQGRL+HGY+LR+GLDSILPV++ALV+MY RCG LD+G+RV
Sbjct: 283 PNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRV 342
Query: 187 FDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEMLFNGIHPSSVSFVSVLGA 345
FD+M RDVVSWNS+ISSYG+HG G+KAI++FEEML NG P+ V+FVSVLGA
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGA 395
Score = 71.2 bits (173), Expect = 8e-11
Identities = 43/115 (37%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 TMVSVIQACTAL-CAVE---QGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGRRV 186
T V++AC A C + +G+ +H ++ R+G +S + ++ LV MYAR G +D V
Sbjct: 180 TYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 187 FDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEML--FNGIHPSSVSFVSVLGA 345
F+ M R+VVSW++MI+ Y +G +A+ F EM+ P+SV+ VSVL A
Sbjct: 240 FNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQA 294
>ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540342|gb|EEF41913.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 414
Score = 176 bits (445), Expect = 2e-42
Identities = 80/115 (69%), Positives = 102/115 (88%)
Frame = +1
Query: 1 LVPYSVTMVSVIQACTALCAVEQGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGR 180
+ P SVTMVSV+QAC AL A+EQG+LLHGY+LR+GLDSILPV+++LV+MYARCG L + +
Sbjct: 275 MCPNSVTMVSVLQACAALAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQ 334
Query: 181 RVFDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEMLFNGIHPSSVSFVSVLGA 345
VFDQM++RDVVSWNS+ISSYG+HG GKKAI++F++M NG+ PS +SFVSVLGA
Sbjct: 335 HVFDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFKDMTRNGVFPSPISFVSVLGA 389
Score = 75.1 bits (183), Expect = 6e-12
Identities = 42/115 (36%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 TMVSVIQACTA----LCAVEQGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGRRV 186
T V++AC A L +++G+ +H +LR+G ++ + ++ LV MYAR G + V
Sbjct: 174 TYTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEAHVHIMTTLVDMYARFGYVSYASCV 233
Query: 187 FDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEMLF--NGIHPSSVSFVSVLGA 345
F +M ++VVSW++MI+ Y +G +A+E+F EM+ + P+SV+ VSVL A
Sbjct: 234 FSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKDMCPNSVTMVSVLQA 288
>ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 176 bits (445), Expect = 2e-42
Identities = 81/113 (71%), Positives = 101/113 (89%)
Frame = +1
Query: 7 PYSVTMVSVIQACTALCAVEQGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGRRV 186
P SVTMVSV+QAC +L A+EQG+L+HGY+LR+GLDSILPV++ALV+MY RCG L++G+RV
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 187 FDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEMLFNGIHPSSVSFVSVLGA 345
FD+M RDVVSWNS+ISSYG+HG GKKAI++FEEML NG P+ V+FVSVLGA
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Score = 70.9 bits (172), Expect = 1e-10
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 TMVSVIQACTAL-CAVE---QGRLLHGYVLRKGLDSILPVVNALVSMYARCGDLDIGRRV 186
T V++AC A C V +G+ +H ++ R+G S + ++ LV MYAR G +D V
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 187 FDQMERRDVVSWNSMISSYGIHGLGKKAIEVFEEML--FNGIHPSSVSFVSVLGA 345
F M R+VVSW++MI+ Y +G +A+ F EM+ P+SV+ VSVL A
Sbjct: 240 FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQA 294