BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045640
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thali...   127   7e-28
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...   126   2e-27
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   126   2e-27
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   123   1e-26
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   120   1e-25

>gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thaliana]
          Length = 199

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/102 (57%), Positives = 77/102 (75%)
 Frame = +3

Query: 3   GPDGMSPGFYQKYWSIVGGDLIQLVQQFFLTEKFDRYITETNIVLIPKRQDPSNMTELRP 182
           GPDGM+  FYQ++W + G DL+++VQ F  +  FD  + ETNI LIPK   P  M E RP
Sbjct: 3   GPDGMTALFYQRFWDLTGPDLVKVVQNFHSSASFDERLNETNICLIPKIDRPRRMAEFRP 62

Query: 183 ISLCNVSYKIASKVMANRVKKVLDGVISETQSAFIPGRLISD 308
           ISLCNVSYK+ SKV+++R+KK+L  +ISETQSAF+ GRLI+D
Sbjct: 63  ISLCNVSYKVISKVLSSRLKKILPDLISETQSAFVAGRLITD 104


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/102 (59%), Positives = 76/102 (74%)
 Frame = +3

Query: 3   GPDGMSPGFYQKYWSIVGGDLIQLVQQFFLTEKFDRYITETNIVLIPKRQDPSNMTELRP 182
           GPDGM+  FYQ YW + G DLI+LVQ F  T  FD  + ETNI LIPK + P  M E RP
Sbjct: 28  GPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEFRP 87

Query: 183 ISLCNVSYKIASKVMANRVKKVLDGVISETQSAFIPGRLISD 308
           ISLCNVSYK+ SKV+++R+K++L  +ISETQSAF+  RLI+D
Sbjct: 88  ISLCNVSYKVISKVLSSRLKRLLPELISETQSAFVAERLITD 129


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/102 (59%), Positives = 76/102 (74%)
 Frame = +3

Query: 3   GPDGMSPGFYQKYWSIVGGDLIQLVQQFFLTEKFDRYITETNIVLIPKRQDPSNMTELRP 182
           GPDGM+  FYQ YW + G DLI+LVQ F  T  FD  + ETNI LIPK + P  M E RP
Sbjct: 394 GPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEFRP 453

Query: 183 ISLCNVSYKIASKVMANRVKKVLDGVISETQSAFIPGRLISD 308
           ISLCNVSYK+ SKV+++R+K++L  +ISETQSAF+  RLI+D
Sbjct: 454 ISLCNVSYKVISKVLSSRLKRLLPELISETQSAFVAERLITD 495


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/102 (57%), Positives = 74/102 (72%)
 Frame = +3

Query: 3   GPDGMSPGFYQKYWSIVGGDLIQLVQQFFLTEKFDRYITETNIVLIPKRQDPSNMTELRP 182
           GPDGM+  F+QK W+I+  DL+ LV  F     FD+ +  TNI LIPK + P+ MTELRP
Sbjct: 231 GPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRP 290

Query: 183 ISLCNVSYKIASKVMANRVKKVLDGVISETQSAFIPGRLISD 308
           ISLCNV YK+ SK++  R+K VL  +ISETQSAF+ GRLISD
Sbjct: 291 ISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISD 332


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  120 bits (300), Expect = 1e-25
 Identities = 59/102 (57%), Positives = 74/102 (72%)
 Frame = +3

Query: 3    GPDGMSPGFYQKYWSIVGGDLIQLVQQFFLTEKFDRYITETNIVLIPKRQDPSNMTELRP 182
            G DG SPGFYQ++W IVG D+      +     F   +T TNIVLIPK+ +  +MT+LRP
Sbjct: 739  GNDGFSPGFYQRHWEIVGEDVANACIGWLNDGMFPDSLTRTNIVLIPKKSEVISMTDLRP 798

Query: 183  ISLCNVSYKIASKVMANRVKKVLDGVISETQSAFIPGRLISD 308
            ISLCNV +KIASK++ NR+KKVLDGV+SE QSAF+P R I D
Sbjct: 799  ISLCNVIFKIASKLLTNRLKKVLDGVVSEAQSAFVPRRSIID 840