BLASTX nr result

ID: Angelica22_contig00045614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045614
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002870791.1| pentatricopeptide repeat-containing protein ...    58   9e-07
ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/80 (45%), Positives = 48/80 (60%)
 Frame = -2

Query: 243 TVHKLKQLLLTTATNAAECRSLLRHYARTKSLTNTKQLHARIISSGXXXXXXXXXXXXXX 64
           T+ K  +LLL   T   + +SLL+HY   +SLT+TKQLHA +I+SG              
Sbjct: 8   TISKTTKLLLAPKTT--QYQSLLKHYGAAQSLTSTKQLHAHLITSG----LLSIDIRSVL 61

Query: 63  XXTYAICGHVSHARQLFDEL 4
             TYA CG+V +AR+LFDEL
Sbjct: 62  VATYAHCGYVHNARKLFDEL 81


>ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316627|gb|EFH47050.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 674

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
 Frame = -2

Query: 231 LKQLLLTTATNAAECR---SLLRHYARTKSLTNTKQLHARIISSGXXXXXXXXXXXXXXX 61
           + ++ L  A NA   +   SLL HYA T+S++ TK LH  +I+ G               
Sbjct: 1   MSEVFLRRAKNALSVKQYQSLLNHYAATQSISKTKALHCHVITGG----RVSGHILSTLS 56

Query: 60  XTYAICGHVSHARQLFDELP 1
            TYA+CGH+++AR+LFDE+P
Sbjct: 57  VTYALCGHIAYARKLFDEMP 76


>ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/81 (41%), Positives = 41/81 (50%)
 Frame = -2

Query: 246 KTVHKLKQLLLTTATNAAECRSLLRHYARTKSLTNTKQLHARIISSGXXXXXXXXXXXXX 67
           K + K K L+     N   C SLLRHYA T+SL  TK LH   I+SG             
Sbjct: 67  KALSKSKSLI----ANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSH 122

Query: 66  XXXTYAICGHVSHARQLFDEL 4
              +YA CG V  AR+LFD+L
Sbjct: 123 LAVSYAFCGCVPLARKLFDDL 143


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