BLASTX nr result

ID: Angelica22_contig00045606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045606
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34155.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...   112   4e-23
ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra...   104   9e-21
ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II tra...   104   9e-21
ref|XP_002328340.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/110 (54%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
 Frame = -2

Query: 326  NFTGVQQTVGLGNPSNAGP--GPQLCANNGNRVGIPGSAGLSRLGNHVNGLSRVGNXXXX 153
            NF G QQT+GL N +N  P  G QL A NGNRVG+P SAG+SR GN   G++RVG+    
Sbjct: 1292 NFAGGQQTIGLANSNNPNPSSGSQLSAANGNRVGLPNSAGISRPGNQATGMNRVGSALSA 1351

Query: 152  XXXXXXXSPGLTLRRPPGAGVPAHVKGELNTSIIXXXXXXXXXXGWVPLV 3
                   + GL LRR PGAGVPAHV+GELNT+II          GWVPLV
Sbjct: 1352 SQNLAMVNSGLPLRRSPGAGVPAHVRGELNTAIIGLGDDGGYGGGWVPLV 1401


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/110 (54%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
 Frame = -2

Query: 326  NFTGVQQTVGLGNPSNAGP--GPQLCANNGNRVGIPGSAGLSRLGNHVNGLSRVGNXXXX 153
            NF G QQT+GL N +N  P  G QL A NGNRVG+P SAG+SR GN   G++RVG+    
Sbjct: 1326 NFAGGQQTIGLANSNNPNPSSGSQLSAANGNRVGLPNSAGISRPGNQATGMNRVGSALSA 1385

Query: 152  XXXXXXXSPGLTLRRPPGAGVPAHVKGELNTSIIXXXXXXXXXXGWVPLV 3
                   + GL LRR PGAGVPAHV+GELNT+II          GWVPLV
Sbjct: 1386 SQNLAMVNSGLPLRRSPGAGVPAHVRGELNTAIIGLGDDGGYGGGWVPLV 1435


>ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like, partial [Cucumis sativus]
          Length = 1332

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/110 (51%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
 Frame = -2

Query: 326  NFTGVQQTVGLGNPSNAGPGP--QLCANNGNRVGIPGSAGLSRLGNHVNGLSRVGNXXXX 153
            NF GVQQTVGL  P+N  P    Q+ A NGNR+ +PGS  + R GN V  ++RVGN    
Sbjct: 900  NFPGVQQTVGLSAPNNQNPNSSSQIAAANGNRLSLPGSPAMPRAGNQVANINRVGNALSG 959

Query: 152  XXXXXXXSPGLTLRRPPGAGVPAHVKGELNTSIIXXXXXXXXXXGWVPLV 3
                   S GL LRR PG GVPAHV+GELNT+II          GWVPLV
Sbjct: 960  SSNLASVSSGLPLRRSPGTGVPAHVRGELNTAIIGLGDDGGYGGGWVPLV 1009


>ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like [Cucumis sativus]
          Length = 1800

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/110 (51%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
 Frame = -2

Query: 326  NFTGVQQTVGLGNPSNAGPGP--QLCANNGNRVGIPGSAGLSRLGNHVNGLSRVGNXXXX 153
            NF GVQQTVGL  P+N  P    Q+ A NGNR+ +PGS  + R GN V  ++RVGN    
Sbjct: 1368 NFPGVQQTVGLSAPNNQNPNSSSQIAAANGNRLSLPGSPAMPRAGNQVANINRVGNALSG 1427

Query: 152  XXXXXXXSPGLTLRRPPGAGVPAHVKGELNTSIIXXXXXXXXXXGWVPLV 3
                   S GL LRR PG GVPAHV+GELNT+II          GWVPLV
Sbjct: 1428 SSNLASVSSGLPLRRSPGTGVPAHVRGELNTAIIGLGDDGGYGGGWVPLV 1477


>ref|XP_002328340.1| predicted protein [Populus trichocarpa] gi|222838055|gb|EEE76420.1|
            predicted protein [Populus trichocarpa]
          Length = 1685

 Score =  100 bits (249), Expect = 1e-19
 Identities = 57/109 (52%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
 Frame = -2

Query: 323  FTGVQQTVGLGNPSNAGPGP--QLCANNGNRVGIPGSAGLSRLGNHVNGLSRVGNXXXXX 150
            F G QQTVGLGN +N  P    QL + NGNRV +P SA +SR  N V  L+RVGN     
Sbjct: 1255 FAGGQQTVGLGNSNNPNPSSVSQLSSVNGNRVNLPSSAAISRAANQVAALNRVGNAVPGS 1314

Query: 149  XXXXXXSPGLTLRRPPGAGVPAHVKGELNTSIIXXXXXXXXXXGWVPLV 3
                  S GL +RR P AGVPAHV+GELNT+II          GWVPLV
Sbjct: 1315 SNLAAVSSGLPIRRSPAAGVPAHVRGELNTAIIGLGDDGGYGGGWVPLV 1363


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