BLASTX nr result

ID: Angelica22_contig00045527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045527
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...    38   1e-07

>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
            gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
            kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
            Group] gi|31431495|gb|AAP53268.1| retrotransposon
            protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1230

 Score = 37.7 bits (86), Expect(3) = 1e-07
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +2

Query: 68   EVDERKMLGPELVPQTKEVIELFRK 142
            EV ERK+LGP+++ QTKE I L RK
Sbjct: 1027 EVGERKLLGPDIIQQTKETIRLIRK 1051



 Score = 32.0 bits (71), Expect(3) = 1e-07
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +1

Query: 127  RIVQKRLTTAQS*QKKYANLAKRDVGCEEEELKFCWVYLR 246
            R+++KRL TAQ+ QK Y +  +RD+  +  +    WVYL+
Sbjct: 1047 RLIRKRLQTAQNRQKSYVDNRRRDLRFDIGD----WVYLK 1082



 Score = 29.6 bits (65), Expect(3) = 1e-07
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +3

Query: 21   YKVIYGRECRSPIYWEKL 74
            Y+ +YGR+CR+P+ W ++
Sbjct: 1011 YEALYGRKCRTPVCWNEV 1028


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