BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045402
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   102   7e-22
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380...   102   8e-22
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...   101   2e-21
gb|AAC98469.1| putative retroelement pol polyprotein [Arabidopsi...   102   5e-21
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]             93   5e-21

>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  102 bits (253), Expect(2) = 7e-22
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = -1

Query: 237  SIGANQTWVITPLPPGEHAIGSKWVYKTKFNHDGTILKHKARLVILGCKQQYCIDYHETF 58
            ++ AN TW IT LP G+ AI SKWVYK K+N DGT+ +HKARLV++G  Q+  +D+ ETF
Sbjct: 1009 ALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETF 1068

Query: 57   APVTKMTTVRTMLAVAA 7
            APV K+TTVRT+LAVAA
Sbjct: 1069 APVAKLTTVRTILAVAA 1085



 Score = 26.6 bits (57), Expect(2) = 7e-22
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -2

Query: 344  YSEIKAYFMCATVSSLA---F*DAVQHDQWVQAMNLELEALE 228
            YS     FM A + S     F DA+   +W +AM+ E++ALE
Sbjct: 970  YSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALE 1011


>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
           At2g23330 [Arabidopsis thaliana]
           gi|110742535|dbj|BAE99183.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 776

 Score =  102 bits (253), Expect(2) = 8e-22
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = -1

Query: 237 SIGANQTWVITPLPPGEHAIGSKWVYKTKFNHDGTILKHKARLVILGCKQQYCIDYHETF 58
           ++ AN TW IT LP G+ AI SKWVYK K+N DGT+ +HKARLV++G  Q+  +D+ ETF
Sbjct: 289 ALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETF 348

Query: 57  APVTKMTTVRTMLAVAA 7
           APV K+TTVRT+LAVAA
Sbjct: 349 APVAKLTTVRTILAVAA 365



 Score = 26.6 bits (57), Expect(2) = 8e-22
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -2

Query: 344 YSEIKAYFMCATVSSLA---F*DAVQHDQWVQAMNLELEALE 228
           YS     FM A + S     F DA+   +W +AM+ E++ALE
Sbjct: 250 YSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALE 291


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score =  101 bits (252), Expect(2) = 2e-21
 Identities = 50/73 (68%), Positives = 57/73 (78%)
 Frame = -1

Query: 225  NQTWVITPLPPGEHAIGSKWVYKTKFNHDGTILKHKARLVILGCKQQYCIDYHETFAPVT 46
            N TW IT LPPG+ AIGSKWVYK K+N DGT+ +HKARLV LG +Q    D+ ETFAPV 
Sbjct: 1012 NHTWDITTLPPGKKAIGSKWVYKLKYNSDGTLERHKARLVALGNRQVEGSDFTETFAPVA 1071

Query: 45   KMTTVRTMLAVAA 7
            KMTTVR +LAVAA
Sbjct: 1072 KMTTVRFLLAVAA 1084



 Score = 25.4 bits (54), Expect(2) = 2e-21
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -2

Query: 344  YSEIKAYFMCATVSSL---AF*DAVQHDQWVQAMNLELEALEQ 225
            +S +   FM A  S     ++  A Q  +W  AM LE+ ALE+
Sbjct: 969  FSGLHRVFMVAITSDTEPTSYHQASQIKEWCAAMGLEITALEE 1011


>gb|AAC98469.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1102

 Score =  102 bits (254), Expect(2) = 5e-21
 Identities = 49/77 (63%), Positives = 60/77 (77%)
 Frame = -1

Query: 237 SIGANQTWVITPLPPGEHAIGSKWVYKTKFNHDGTILKHKARLVILGCKQQYCIDYHETF 58
           ++ AN TW +T LP G+ AI SKWVYK KFN DGT+ +HKARLV++G  Q+  ID+ ETF
Sbjct: 641 ALEANHTWDVTDLPHGKKAISSKWVYKLKFNSDGTLERHKARLVVMGNHQKEGIDFKETF 700

Query: 57  APVTKMTTVRTMLAVAA 7
           APV KMTTVR +LAVAA
Sbjct: 701 APVAKMTTVRLLLAVAA 717



 Score = 23.5 bits (49), Expect(2) = 5e-21
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -2

Query: 323 FMCATVSSLA---F*DAVQHDQWVQAMNLELEALE 228
           FM A + S     F D V   +W  AM  E+EALE
Sbjct: 609 FMAAILDSNEQNHFKDDVLIKEWCDAMQKEIEALE 643


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score = 93.2 bits (230), Expect(2) = 5e-21
 Identities = 44/83 (53%), Positives = 57/83 (68%)
 Frame = -1

Query: 252 EFRARSIGANQTWVITPLPPGEHAIGSKWVYKTKFNHDGTILKHKARLVILGCKQQYCID 73
           E   +++  N TW + PLP G+ AIG KWVYK KFN  G + ++KARLV  G  QQ  +D
Sbjct: 693 ELELKALHDNHTWDLVPLPLGKKAIGCKWVYKVKFNAQGEVERYKARLVAKGYTQQEGLD 752

Query: 72  YHETFAPVTKMTTVRTMLAVAAM 4
           Y ETF+PV KM TVR +L++AAM
Sbjct: 753 YQETFSPVVKMVTVRVVLSLAAM 775



 Score = 32.7 bits (73), Expect(2) = 5e-21
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -2

Query: 287 DAVQHDQWVQAMNLELEAL 231
           +AVQH  W+QAM LEL+AL
Sbjct: 681 EAVQHSHWIQAMELELKAL 699