BLASTX nr result

ID: Angelica22_contig00045263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045263
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containi...   127   9e-28
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   127   1e-27
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ...   122   4e-26

>ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/89 (68%), Positives = 72/89 (80%)
 Frame = -2

Query: 270 TLRLIKTPSQALHFFIWAHKNGFTHTHQSYFLMLQILSHTRNFNTARNFLFSIEKKSNGT 91
           TLRLIK PS+AL FF W  + GF+HT +SYF+ML+IL   RN N ARNFLFSIEK S GT
Sbjct: 84  TLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGT 143

Query: 90  VKIDDKFFNVLIRSYANAGLFGESIKLFK 4
           VK++D+FFN LIRSYA AGLF ES+KLF+
Sbjct: 144 VKLEDRFFNSLIRSYAEAGLFKESMKLFQ 172


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/89 (67%), Positives = 71/89 (79%)
 Frame = -2

Query: 270 TLRLIKTPSQALHFFIWAHKNGFTHTHQSYFLMLQILSHTRNFNTARNFLFSIEKKSNGT 91
           TL+LI+TP++ALHFF W    GFTH  QSYFLM++IL  +RN N ARNF+FSIEKKS G 
Sbjct: 101 TLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGA 160

Query: 90  VKIDDKFFNVLIRSYANAGLFGESIKLFK 4
           VK+ D+FFN LIRSY  AGLF ESIK+FK
Sbjct: 161 VKLGDRFFNSLIRSYGWAGLFQESIKVFK 189


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/89 (67%), Positives = 71/89 (79%)
 Frame = -2

Query: 270 TLRLIKTPSQALHFFIWAHKNGFTHTHQSYFLMLQILSHTRNFNTARNFLFSIEKKSNGT 91
           TL+LI+TP++ALHFF W    GFTH  QSYFLM++IL  +RN N ARNF+FSIEKKS G 
Sbjct: 101 TLQLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGA 160

Query: 90  VKIDDKFFNVLIRSYANAGLFGESIKLFK 4
           VK+ D+FFN LIRSY  AGLF ESIK+FK
Sbjct: 161 VKLGDRFFNSLIRSYGWAGLFQESIKVFK 189


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/89 (67%), Positives = 73/89 (82%)
 Frame = -2

Query: 267 LRLIKTPSQALHFFIWAHKNGFTHTHQSYFLMLQILSHTRNFNTARNFLFSIEKKSNGTV 88
           LRLIKTPS+AL FF WA + GFTH  QSYFLML+IL   RN N ARNFLFSI+++SNGTV
Sbjct: 93  LRLIKTPSKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTV 152

Query: 87  KIDDKFFNVLIRSYANAGLFGESIKLFKN 1
           K++D+FFN LIRSY  AGLF ES+++F +
Sbjct: 153 KLEDRFFNSLIRSYGKAGLFQESVQVFNS 181


>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497542|gb|AES78745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/90 (62%), Positives = 71/90 (78%)
 Frame = -2

Query: 270 TLRLIKTPSQALHFFIWAHKNGFTHTHQSYFLMLQILSHTRNFNTARNFLFSIEKKSNGT 91
           TLR IK P++A  FF W H+ GF+H  Q+YF+ML+IL   +N N ARNFL+SIEK+SNG 
Sbjct: 91  TLRHIKVPTKAFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGE 150

Query: 90  VKIDDKFFNVLIRSYANAGLFGESIKLFKN 1
           VK++D+FFN LIRSY  AGLF ES+KLF+N
Sbjct: 151 VKLEDRFFNSLIRSYGEAGLFKESVKLFEN 180


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