BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045212
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D sub...    80   2e-13
ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D sub...    80   2e-13
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...    80   2e-13
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...    79   3e-13
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    79   5e-13

>ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine
           max]
          Length = 1622

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/71 (53%), Positives = 49/71 (69%)
 Frame = +3

Query: 36  KSASSDAFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKGNFFYS 215
           K+ SS++ LW GKQLFS+LLP DF Y+ PS  V +  GEL++S   S WLRD+  N F S
Sbjct: 530 KAPSSNSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQS 589

Query: 216 LVSHCQGEFLD 248
           LV H QG+ L+
Sbjct: 590 LVEHYQGKTLN 600


>ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine
           max]
          Length = 1461

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = +3

Query: 36  KSASSDAFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKGNFFYS 215
           K+ SS++ LW+GKQ+FS+LLP DF Y+ PS  V +  GEL++S   S WLRD+  N F S
Sbjct: 537 KAPSSNSSLWSGKQIFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQS 596

Query: 216 LVSHCQGEFLD 248
           LV H QG+ L+
Sbjct: 597 LVEHYQGKTLN 607


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/71 (54%), Positives = 46/71 (64%)
 Frame = +3

Query: 36  KSASSDAFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKGNFFYS 215
           K+   +   WTGKQLFSLLLP D  Y  PS+ V I +GE++TS   SSWLRD   N FYS
Sbjct: 210 KAPPGNICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDASDNLFYS 269

Query: 216 LVSHCQGEFLD 248
           LV H  G+ LD
Sbjct: 270 LVKHNGGDTLD 280


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1687

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/72 (52%), Positives = 49/72 (68%)
 Frame = +3

Query: 33  FKSASSDAFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKGNFFY 212
           FK+ SS+   W+GKQLFS+LLP  F Y  PS+ V +  GELI+   +S WLRD++ N F 
Sbjct: 695 FKAPSSNTPFWSGKQLFSMLLPSKFDYAFPSNDVFVKDGELISCSESSGWLRDSENNVFQ 754

Query: 213 SLVSHCQGEFLD 248
           SLV H QG+ LD
Sbjct: 755 SLVEHFQGKILD 766


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/71 (54%), Positives = 47/71 (66%)
 Frame = +3

Query: 36  KSASSDAFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKGNFFYS 215
           K+   D  +WTGKQLFS+LLP  F Y  P + V+I  GELI+S   S+WLRD  GN F S
Sbjct: 565 KAPLLDTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSS 624

Query: 216 LVSHCQGEFLD 248
           LV  CQG+ LD
Sbjct: 625 LVKDCQGKALD 635