BLASTX nr result

ID: Angelica22_contig00045180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045180
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    62   5e-08
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]             58   9e-07
emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]    57   2e-06
gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus v...    57   2e-06
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    57   2e-06

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/96 (38%), Positives = 48/96 (50%)
 Frame = +1

Query: 4   LHNVLHIPQFQYNLISVRRLCIDMHCSVIFNGTDCIIQDXXXXXXXXXXGKFHGGLYSTA 183
           L +VL +P F  NLIS  +L  D +C +IF    CI+QD          GK  GGLY   
Sbjct: 694 LKDVLCVPSFNLNLISASKLAKDQNCYIIFFPDYCILQD-LVSGKMIGSGKQRGGLYYMH 752

Query: 184 SLFDKKSMLSVKEDFSVWLLRLGHVPFSRLHLILAL 291
              +K  +  V +   +W LRLGH  FSR  L+  L
Sbjct: 753 PSTNKSVVFHVSQPSDLWHLRLGHPSFSRFKLLSRL 788


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
 Frame = +1

Query: 4   LHNVLHIPQFQYNLISVRRLCIDMHCSVIFNGTDCIIQDXXXXXXXXXXGKFHGGLY--- 174
           + +VL+IP F+YNL+SV  L  ++HC ++F    CI+QD          G    GLY   
Sbjct: 183 ISHVLYIPDFKYNLLSVSELTKELHCCMVFYPDHCILQD-LHTVKVKGTGSMENGLYYWS 241

Query: 175 -----STASLFDKKSMLSVKEDFSVWLLRLGHVP 261
                + A        LS  +D  +W  RLGH+P
Sbjct: 242 HIVSPTVAYSVSPSVALSTLDDVDLWHRRLGHIP 275


>emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]
          Length = 1248

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
 Frame = +1

Query: 1   VLHNVLHIPQFQYNLISVRRLCIDMHCSVIFNGTDCIIQDXXXXXXXXXXGKFHGGLY-- 174
           +L NVLH+P+   NLIS+++L  D+HC+V+F  + C+ QD           +   GLY  
Sbjct: 330 ILKNVLHVPRLTMNLISIQKLTQDLHCNVVFYHSHCVFQD-EDSGRMIGHARERDGLYYL 388

Query: 175 ---STASLFDKKSMLS-VKEDFS-----VWL--LRLGHVPFSRLHLI 282
              S +++   KS  S V EDFS     VWL   RLGH  F  + ++
Sbjct: 389 KAPSQSNITKGKSSHSFVSEDFSFNKEKVWLHHRRLGHPSFRVIKIL 435


>gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus vulgaris]
          Length = 1009

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
 Frame = +1

Query: 4   LHNVLHIPQFQYNLISVRRLCIDMHCSVIFNGTDCIIQDXXXXXXXXXXGKFHGGLYSTA 183
           L +VL++PQ  +NL+S  +L ++M+CS+IF+  +C+IQD               GLY+  
Sbjct: 674 LIDVLYVPQLSFNLVSTSKLSLNMNCSLIFSSNNCMIQDNTTKERIGIV-SVKAGLYAFE 732

Query: 184 SLFDKK--------SMLSVKEDFSVWLLRLGHVPFSRLHLI 282
           S F +         S     +D ++W  R+GH+   RL+++
Sbjct: 733 SSFFRNTATHTIAHSFNCTVKDINLWHYRMGHLSDERLNVL 773


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 39/91 (42%), Positives = 49/91 (53%)
 Frame = +1

Query: 1   VLHNVLHIPQFQYNLISVRRLCIDMHCSVIFNGTDCIIQDXXXXXXXXXXGKFHGGLYST 180
           +L NVL IP+F+ NLIS+  L  D+   VIF+ + C IQD          GK  G LY  
Sbjct: 493 ILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQD-LTKGLTLGEGKRIGNLYVL 551

Query: 181 ASLFDKKSMLSVKEDFSVWLLRLGHVPFSRL 273
            +     S+ +V  D SVW  RLGH  FSRL
Sbjct: 552 DTQSPAISVNAV-VDVSVWHKRLGHPSFSRL 581


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