BLASTX nr result

ID: Angelica22_contig00045137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045137
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-45
ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_003624391.1| Pentatricopeptide repeat-containing protein ...   176   1e-42
tpg|DAA35362.1| TPA: hypothetical protein ZEAMMB73_898339 [Zea m...   171   6e-41

>ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
           [Vitis vinifera] gi|296087996|emb|CBI35279.3| unnamed
           protein product [Vitis vinifera]
          Length = 598

 Score =  186 bits (473), Expect = 1e-45
 Identities = 88/128 (68%), Positives = 100/128 (78%)
 Frame = +1

Query: 1   RTVVSWTTMIMGYAQNGDARKALDIFSDMRVEGPEPNYITFICVLYACSLGGYIDEAWTH 180
           R+VVSWTTMIMG+AQNG ARKAL+IF  MR EG  PNYITFICVLYACS GG I+E W +
Sbjct: 414 RSVVSWTTMIMGFAQNGQARKALEIFEQMRAEGKAPNYITFICVLYACSQGGLINEGWEY 473

Query: 181 ISSMTDTYGISPGEDHYACMVNLLGLAGRTKEAEALILNMPSKPGVLVWQTLLGACRLHG 360
             SM   +GISPGEDHYACMV++LG AG  KEA  LI  MP +  VLVWQTLLGACR+HG
Sbjct: 474 FLSMDRDHGISPGEDHYACMVDMLGRAGHIKEARELIRRMPFQASVLVWQTLLGACRVHG 533

Query: 361 DIDTATRA 384
           D++T   A
Sbjct: 534 DVETGLLA 541


>ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 769

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/128 (67%), Positives = 101/128 (78%)
 Frame = +1

Query: 1   RTVVSWTTMIMGYAQNGDARKALDIFSDMRVEGPEPNYITFICVLYACSLGGYIDEAWTH 180
           R+VVSWTTMIMG+A NG  ++AL IF +MR    EPN+ITFICVL ACS GG+IDEAW +
Sbjct: 582 RSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKY 641

Query: 181 ISSMTDTYGISPGEDHYACMVNLLGLAGRTKEAEALILNMPSKPGVLVWQTLLGACRLHG 360
            SSM+  +GI+P EDHY CMVNLLG AG  KEAE LIL MP +PG LVWQTLLGAC +HG
Sbjct: 642 FSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHG 701

Query: 361 DIDTATRA 384
           DI+T  RA
Sbjct: 702 DIETGKRA 709


>ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 769

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/128 (67%), Positives = 101/128 (78%)
 Frame = +1

Query: 1   RTVVSWTTMIMGYAQNGDARKALDIFSDMRVEGPEPNYITFICVLYACSLGGYIDEAWTH 180
           R+VVSWTTMIMG+A NG  ++AL IF +MR    EPN+ITFICVL ACS GG+IDEAW +
Sbjct: 582 RSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKY 641

Query: 181 ISSMTDTYGISPGEDHYACMVNLLGLAGRTKEAEALILNMPSKPGVLVWQTLLGACRLHG 360
            SSM+  +GI+P EDHY CMVNLLG AG  KEAE LIL MP +PG LVWQTLLGAC +HG
Sbjct: 642 FSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHG 701

Query: 361 DIDTATRA 384
           DI+T  RA
Sbjct: 702 DIETGKRA 709


>ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499406|gb|AES80609.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 709

 Score =  176 bits (447), Expect = 1e-42
 Identities = 82/128 (64%), Positives = 97/128 (75%)
 Frame = +1

Query: 1   RTVVSWTTMIMGYAQNGDARKALDIFSDMRVEGPEPNYITFICVLYACSLGGYIDEAWTH 180
           R+VVSWTTMIM  AQNG   +AL IF +M+    EPNYITFICVLYACS GG++DE W +
Sbjct: 372 RSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKY 431

Query: 181 ISSMTDTYGISPGEDHYACMVNLLGLAGRTKEAEALILNMPSKPGVLVWQTLLGACRLHG 360
           +SSM   YGI PGEDHY CMV++LG AG  KEA+ LIL MP  PGV VWQTLL AC++HG
Sbjct: 432 LSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHG 491

Query: 361 DIDTATRA 384
           D++T   A
Sbjct: 492 DVETGKLA 499



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1   RTVVSWTTMIMGYAQNGDARKALDIFSDMRVEG-PEPNYITFICVLYACSLGGYIDEAWT 177
           R VVSW++++ G   NG A  AL +FS M  EG  +PN  TF+  L ACSL   + +A+ 
Sbjct: 69  RNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAY- 127

Query: 178 HISSMTDTYGISPGEDHYACMVNLLGLAGRTKEAEALILNMPSKPGVLVWQTLLG 342
            I S+    G+          +  L   G+  EA  +    P +  V  W T++G
Sbjct: 128 QIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTV-TWNTMMG 181


>tpg|DAA35362.1| TPA: hypothetical protein ZEAMMB73_898339 [Zea mays]
          Length = 605

 Score =  171 bits (433), Expect = 6e-41
 Identities = 76/128 (59%), Positives = 96/128 (75%)
 Frame = +1

Query: 1   RTVVSWTTMIMGYAQNGDARKALDIFSDMRVEGPEPNYITFICVLYACSLGGYIDEAWTH 180
           R V+SWT MIM +A NG AR+A+++F DM + G  PN +T +CVLYACS GG++DE W +
Sbjct: 415 RPVISWTAMIMAFAHNGRAREAVEVFDDMLLRGVAPNRVTLVCVLYACSQGGFVDEGWIY 474

Query: 181 ISSMTDTYGISPGEDHYACMVNLLGLAGRTKEAEALILNMPSKPGVLVWQTLLGACRLHG 360
            ++M D +GI PGEDHYACMV+LLG AG+ +EAE LI  MP +PGVLVWQ LLGAC LHG
Sbjct: 475 FNAMKDKFGIQPGEDHYACMVDLLGKAGQIEEAEELISGMPFRPGVLVWQALLGACHLHG 534

Query: 361 DIDTATRA 384
           +     RA
Sbjct: 535 NEAVGRRA 542


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