BLASTX nr result

ID: Angelica22_contig00045049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00045049
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264013.1| PREDICTED: cytochrome c oxidase subunit 6a, ...   100   2e-19
ref|XP_002866930.1| hypothetical protein ARALYDRAFT_912546 [Arab...    98   6e-19
gb|AFK34929.1| unknown [Lotus japonicus] gi|388511333|gb|AFK4372...    97   2e-18
ref|NP_195496.1| cytochrome c oxidase subunit VIa [Arabidopsis t...    96   4e-18
ref|NP_001051412.1| Os03g0772800 [Oryza sativa Japonica Group] g...    93   2e-17

>ref|XP_002264013.1| PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Vitis
           vinifera] gi|297745701|emb|CBI41023.3| unnamed protein
           product [Vitis vinifera]
          Length = 98

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/79 (65%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = +1

Query: 25  MASAMVRSALRNVQLRRTPAISA-RTFSSKPGVDDAYESAKWEKITYAGIVSCTVLAFVV 201
           MA AMVRS LR     RTPA +  R +SS  G DDA E+AKWEKITY GI +CTVLA V 
Sbjct: 1   MAMAMVRSGLRTALRSRTPAAAPKRNYSSSAGHDDARETAKWEKITYLGIATCTVLAVVN 60

Query: 202 LSKGHTHFEEPPPYSYLHI 258
           LSKGH H EEPP Y YLHI
Sbjct: 61  LSKGHPHHEEPPRYDYLHI 79


>ref|XP_002866930.1| hypothetical protein ARALYDRAFT_912546 [Arabidopsis lyrata subsp.
           lyrata] gi|297312766|gb|EFH43189.1| hypothetical protein
           ARALYDRAFT_912546 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/81 (61%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
 Frame = +1

Query: 25  MASAMVRSALRNVQLRRTPAISA---RTFSSKPGVDDAYESAKWEKITYAGIVSCTVLAF 195
           MA+A+VRSAL    +R  P  S    R FSS  G DDAYE+AKWEKITY GI SCT LA 
Sbjct: 1   MATAIVRSALSRAAIRVAPRTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 196 VVLSKGHTHFEEPPPYSYLHI 258
            VLSKGH H E+PP Y Y+HI
Sbjct: 61  YVLSKGHHHGEDPPAYPYMHI 81


>gb|AFK34929.1| unknown [Lotus japonicus] gi|388511333|gb|AFK43728.1| unknown
           [Lotus japonicus]
          Length = 102

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/82 (63%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
 Frame = +1

Query: 25  MASAMVRSALRNVQLR---RTPAISA-RTFSSKPGVDDAYESAKWEKITYAGIVSCTVLA 192
           MASA+VRSAL    LR   R  +++  R FSS  G DDAYE+AKWEKITY GI SCT LA
Sbjct: 1   MASALVRSALLRTTLRGGARGGSLTPKRNFSSSGGHDDAYETAKWEKITYLGIASCTALA 60

Query: 193 FVVLSKGHTHFEEPPPYSYLHI 258
              LSKGH H+EEPP Y YLHI
Sbjct: 61  AYCLSKGHPHYEEPPAYPYLHI 82


>ref|NP_195496.1| cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
           gi|75213718|sp|Q9T070.1|COX6A_ARATH RecName:
           Full=Cytochrome c oxidase subunit 6a, mitochondrial;
           Short=AtCOX6a; Flags: Precursor
           gi|11908090|gb|AAG41474.1|AF326892_1 unknown protein
           [Arabidopsis thaliana]
           gi|12642898|gb|AAK00391.1|AF339709_1 unknown protein
           [Arabidopsis thaliana]
           gi|14190491|gb|AAK55726.1|AF380645_1
           AT4g37830/T28I19_110 [Arabidopsis thaliana]
           gi|4490728|emb|CAB38931.1| putative protein [Arabidopsis
           thaliana] gi|7270766|emb|CAB80448.1| putative protein
           [Arabidopsis thaliana] gi|15810105|gb|AAL06978.1|
           AT4g37830/T28I19_110 [Arabidopsis thaliana]
           gi|110737597|dbj|BAF00740.1| hypothetical protein
           [Arabidopsis thaliana] gi|332661442|gb|AEE86842.1|
           cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
          Length = 102

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/81 (60%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = +1

Query: 25  MASAMVRSALRNVQLRRTPAISA---RTFSSKPGVDDAYESAKWEKITYAGIVSCTVLAF 195
           MA+A+VRSAL     R  P  S    R FSS  G DDAYE+AKWEKITY GI SCT LA 
Sbjct: 1   MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 196 VVLSKGHTHFEEPPPYSYLHI 258
            VLSKGH H E+PP Y ++HI
Sbjct: 61  YVLSKGHHHGEDPPAYPHMHI 81


>ref|NP_001051412.1| Os03g0772800 [Oryza sativa Japonica Group]
           gi|31745230|gb|AAP68890.1| putative cytochrome c oxidase
           subunit VIa precursor [Oryza sativa Japonica Group]
           gi|108711306|gb|ABF99101.1| Cytochrome c oxidase subunit
           VIa family protein, expressed [Oryza sativa Japonica
           Group] gi|113549883|dbj|BAF13326.1| Os03g0772800 [Oryza
           sativa Japonica Group] gi|218193823|gb|EEC76250.1|
           hypothetical protein OsI_13691 [Oryza sativa Indica
           Group] gi|222625879|gb|EEE60011.1| hypothetical protein
           OsJ_12754 [Oryza sativa Japonica Group]
           gi|313575820|gb|ADR66989.1| cytochrome c oxidase [Oryza
           sativa Japonica Group]
          Length = 98

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
 Frame = +1

Query: 25  MASAMVRSALRNVQLRR--TPAISARTFSSKPGVDDAYESAKWEKITYAGIVSCTVLAFV 198
           MASA  RS LR++  R   T A +AR   S    DDA+E+AKWEKITYAGIV+CT+LA  
Sbjct: 1   MASAAARSGLRSLAARAKATAAPAARRRMSSSAHDDAHETAKWEKITYAGIVTCTLLAAY 60

Query: 199 VLSKGHTHFEEPPPYSYLHI 258
            LSKGH HF+EPP Y YLHI
Sbjct: 61  NLSKGHPHFDEPPAYPYLHI 80


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