BLASTX nr result

ID: Angelica22_contig00044466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00044466
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   6e-09
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    60   2e-07
emb|CAN61457.1| hypothetical protein VITISV_029796 [Vitis vinifera]    59   5e-07
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    55   5e-06
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    55   8e-06

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/80 (41%), Positives = 44/80 (55%)
 Frame = -1

Query: 300  RDCPAAKMV*R*IGGPSHEHQFFSGNLKHWITENLKGSTASNKEVWSTFFGVATWWIWRW 121
            R CP A+++ R +G    EH     NL  WIT+NL   T    E W   F V+ WW+WRW
Sbjct: 1100 RRCPVARILWRKLGMLG-EHNREEINLGSWITKNLSADTMMGSE-WLRVFAVSCWWLWRW 1157

Query: 120  RNCFVFDRKNEIPVDVGAFL 61
            RN   F+R   IP+D  +F+
Sbjct: 1158 RNDRCFNRNPSIPIDQVSFI 1177


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/69 (37%), Positives = 37/69 (53%)
 Frame = -1

Query: 300  RDCPAAKMV*R*IGGPSHEHQFFSGNLKHWITENLKGSTASNKEVWSTFFGVATWWIWRW 121
            RDCPA + + R +      H+FFS +L  W+  N+       K +W T FG+  WW W+W
Sbjct: 959  RDCPAMEPIWRRLLPLRRHHEFFSQSLLEWLFTNMDPV----KGIWPTLFGMGIWWAWKW 1014

Query: 120  RNCFVFDRK 94
            R C VF  +
Sbjct: 1015 RCCDVFGER 1023


>emb|CAN61457.1| hypothetical protein VITISV_029796 [Vitis vinifera]
          Length = 358

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = -1

Query: 300 RDCPAAKMV*R*IGGPSHEHQFFSGNLKHWITENLKGSTASNKEV-WSTFFGVATWWIWR 124
           RDCP A    + +   +  ++FFSG  + W+T+N+         + W+  F +  WW+WR
Sbjct: 32  RDCPHAMAFWQVLLPGNKWNEFFSGECREWLTKNVMRREIEGIPLQWNVLFALGCWWLWR 91

Query: 123 WRNCFVFDRKNEIPVDVGAFL 61
           WRN  VF+   ++P +  AF+
Sbjct: 92  WRNQRVFEPGKQLPFNKVAFV 112


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 22/66 (33%), Positives = 34/66 (51%)
 Frame = -1

Query: 300 RDCPAAKMV*R*IGGPSHEHQFFSGNLKHWITENLKGSTASNKEVWSTFFGVATWWIWRW 121
           +DCP+   + R +      + FF+G+L  W+  NL    A     W+T F +  WW W+W
Sbjct: 733 KDCPSIAGIWRRLVQVQRSYDFFNGSLFGWLYVNLGMKNAETGYAWATLFAIVVWWSWKW 792

Query: 120 RNCFVF 103
           R  +VF
Sbjct: 793 RCGYVF 798


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/66 (34%), Positives = 34/66 (51%)
 Frame = -1

Query: 300 RDCPAAKMV*R*IGGPSHEHQFFSGNLKHWITENLKGSTASNKEVWSTFFGVATWWIWRW 121
           RDCPA   +   +     + +FF  +L  W+  NLK  + S +  W T F +  WW W+W
Sbjct: 400 RDCPAMMGIWMRVVPVMEQRRFFETSLLEWMYGNLKERSDSERRSWPTLFALTVWWGWKW 459

Query: 120 RNCFVF 103
           R  +VF
Sbjct: 460 RCGYVF 465


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