BLASTX nr result

ID: Angelica22_contig00044378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00044378
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95226.1| retrotransposon protein, putative, unclassified [...    99   3e-19
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...    99   3e-19
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...    99   4e-19
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]      99   4e-19
gb|ACB28472.1| polyprotein [Ananas comosus]                            98   6e-19

>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1513

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/83 (55%), Positives = 61/83 (73%)
 Frame = +2

Query: 2    TNVPATFQGVMNEIFHDYIGSFVLVFFDDILIYSKDLSKHREHLRLVFERLQQNHLHVKR 181
            TN PATFQ +MN++   +   FVLVFFDDILIYSKD  +H+EH+RLV + L+ N+L +K 
Sbjct: 769  TNAPATFQSLMNQVLAPFFRKFVLVFFDDILIYSKDREEHKEHIRLVLQVLKANNLVIKP 828

Query: 182  SKCAFAQSSIKYLVLVISHDGIA 250
             KCAF  SS+ YL  +IS +G+A
Sbjct: 829  KKCAFGLSSVSYLGHIISQNGVA 851


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1411

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/83 (55%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   TNVPATFQGVMNEIFHDYIGSFVLVFFDDILIYSKDLSKHREHLRLVFERLQQNHLHVKR 181
           TN PATFQ +MN++   +   FVLVFFDDILIYSKD  +H+EH+RLV + L+ N+L +K 
Sbjct: 667 TNAPATFQSLMNQVLAPFFRKFVLVFFDDILIYSKDREEHKEHIRLVLQVLKANNLVIKP 726

Query: 182 SKCAFAQSSIKYLVLVISHDGIA 250
            KCAF  SS+ YL  +IS +G+A
Sbjct: 727 KKCAFGLSSVSYLGHIISQNGVA 749


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/92 (53%), Positives = 63/92 (68%)
 Frame = +2

Query: 2    TNVPATFQGVMNEIFHDYIGSFVLVFFDDILIYSKDLSKHREHLRLVFERLQQNHLHVKR 181
            TN PATFQ +MN IF  Y+  FVLVFFDD+LIYSK + +H EHLRLV   LQ++ L   R
Sbjct: 1913 TNAPATFQALMNSIFKPYLRKFVLVFFDDVLIYSKTVEEHAEHLRLVLSVLQEHKLLANR 1972

Query: 182  SKCAFAQSSIKYLVLVISHDGIAAARIRSKQC 277
             KC+F    I+YL  +IS +G+A   I++ QC
Sbjct: 1973 KKCSFGLQQIEYLGHIISKNGVATDAIKT-QC 2003


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/83 (56%), Positives = 60/83 (72%)
 Frame = +2

Query: 2   TNVPATFQGVMNEIFHDYIGSFVLVFFDDILIYSKDLSKHREHLRLVFERLQQNHLHVKR 181
           TN PATFQ +MN +   ++  FVLVFFDDILIYSK  ++H EH++LV + LQ NHL +K 
Sbjct: 699 TNDPATFQSLMNHVLAPFLRRFVLVFFDDILIYSKTRAEHLEHVKLVMQALQDNHLVIKL 758

Query: 182 SKCAFAQSSIKYLVLVISHDGIA 250
            KCAF  +S+ YL  VIS DG+A
Sbjct: 759 KKCAFGLASVSYLGHVISQDGVA 781


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/83 (54%), Positives = 61/83 (73%)
 Frame = +2

Query: 2   TNVPATFQGVMNEIFHDYIGSFVLVFFDDILIYSKDLSKHREHLRLVFERLQQNHLHVKR 181
           TN P+TFQG+MN IF  Y+  F+LVFFDDIL+YSK + +H  HLR  F+ L+Q+ L V+R
Sbjct: 356 TNAPSTFQGLMNHIFKPYLRRFILVFFDDILVYSKGVEEHLCHLRTTFQVLRQHSLFVRR 415

Query: 182 SKCAFAQSSIKYLVLVISHDGIA 250
            KC FA   ++YL  VISH+G++
Sbjct: 416 KKCIFAAVQLEYLGHVISHEGVS 438


Top