BLASTX nr result
ID: Angelica22_contig00044296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00044296
(327 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003593014.1| Pentatricopeptide repeat-containing protein ... 94 9e-18
gb|ABR17838.1| unknown [Picea sitchensis] 87 2e-15
ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera] 84 2e-14
ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13
>ref|XP_003593014.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482062|gb|AES63265.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 628
Score = 94.4 bits (233), Expect = 9e-18
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 40 KSRSVASWNALIVGHLQLGQPMEALNLFVLMIEEKQKPDLISLANGILCCADLGLLREGK 219
K V SWN LI G+L+ GQ +EA LF M+ PDL++LAN I CC +L L GK
Sbjct: 184 KRTKVGSWNTLIAGYLRNGQALEAFELFRRMMCRNILPDLLTLANVIFCCVELNYLHRGK 243
Query: 220 SVQGYALRSGIELDIVTITALIDLYLKCDNT 312
S+ GY + G+ELD+V TAL+DLY K D T
Sbjct: 244 SIHGYMIMMGVELDLVASTALVDLYCKIDVT 274
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 86.7 bits (213), Expect = 2e-15
Identities = 47/109 (43%), Positives = 63/109 (57%)
Frame = +1
Query: 1 GKPYNAMIVCTNIKSRSVASWNALIVGHLQLGQPMEALNLFVLMIEEKQKPDLISLANGI 180
G NA V + R V SWNA+I G+ Q GQP EAL LF M KP+ +L + +
Sbjct: 169 GSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVM 228
Query: 181 LCCADLGLLREGKSVQGYALRSGIELDIVTITALIDLYLKCDNTYTALK 327
CA L L +GK + YA+RSGIE D++ + L+++Y KC N TA K
Sbjct: 229 PVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHK 277
Score = 84.3 bits (207), Expect = 9e-15
Identities = 42/109 (38%), Positives = 63/109 (57%)
Frame = +1
Query: 1 GKPYNAMIVCTNIKSRSVASWNALIVGHLQLGQPMEALNLFVLMIEEKQKPDLISLANGI 180
G +A + + ++V +WNA+I G+ Q G P EAL LF+ M + KPD ++ + +
Sbjct: 371 GNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVL 430
Query: 181 LCCADLGLLREGKSVQGYALRSGIELDIVTITALIDLYLKCDNTYTALK 327
CA L +GK + GY +RSG E ++V T L+D+Y KC N TA K
Sbjct: 431 PACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQK 479
Score = 71.6 bits (174), Expect = 6e-11
Identities = 39/94 (41%), Positives = 55/94 (58%)
Frame = +1
Query: 46 RSVASWNALIVGHLQLGQPMEALNLFVLMIEEKQKPDLISLANGILCCADLGLLREGKSV 225
R VASWNA+I G+ Q EAL F M KP+ I++ + + CA L L +G+ +
Sbjct: 285 RDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQI 344
Query: 226 QGYALRSGIELDIVTITALIDLYLKCDNTYTALK 327
GYA+RSG E + V AL+++Y KC N +A K
Sbjct: 345 HGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYK 378
>ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product
[Vitis vinifera]
Length = 688
Score = 83.6 bits (205), Expect = 2e-14
Identities = 37/104 (35%), Positives = 66/104 (63%)
Frame = +1
Query: 16 AMIVCTNIKSRSVASWNALIVGHLQLGQPMEALNLFVLMIEEKQKPDLISLANGILCCAD 195
A+ + I R V W+A+I G + G+ +E++++F M+ + P+ ++ A+ +L C+
Sbjct: 269 ALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSS 328
Query: 196 LGLLREGKSVQGYALRSGIELDIVTITALIDLYLKCDNTYTALK 327
LG L++G+SV GY +R+G+ELD+ T+ ID+Y KC TA +
Sbjct: 329 LGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYR 372
>emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
Length = 596
Score = 83.6 bits (205), Expect = 2e-14
Identities = 37/104 (35%), Positives = 66/104 (63%)
Frame = +1
Query: 16 AMIVCTNIKSRSVASWNALIVGHLQLGQPMEALNLFVLMIEEKQKPDLISLANGILCCAD 195
A+ + I R V W+A+I G + G+ +E++++F M+ + P+ ++ A+ +L C+
Sbjct: 205 ALXLFEXIXYRBVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSS 264
Query: 196 LGLLREGKSVQGYALRSGIELDIVTITALIDLYLKCDNTYTALK 327
LG L++G+SV GY +R+G+ELD+ T+ ID+Y KC TA +
Sbjct: 265 LGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYR 308
>ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|222869047|gb|EEF06178.1|
predicted protein [Populus trichocarpa]
Length = 924
Score = 79.7 bits (195), Expect = 2e-13
Identities = 39/95 (41%), Positives = 58/95 (61%)
Frame = +1
Query: 37 IKSRSVASWNALIVGHLQLGQPMEALNLFVLMIEEKQKPDLISLANGILCCADLGLLREG 216
I ++V+SWNALI GH Q G P +AL+L M Q+PD ++++ +L CA L L+ G
Sbjct: 411 IGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYG 470
Query: 217 KSVQGYALRSGIELDIVTITALIDLYLKCDNTYTA 321
K + GY LR+G+E D T+L+ Y+ C +A
Sbjct: 471 KEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSA 505
Score = 60.5 bits (145), Expect = 1e-07
Identities = 33/100 (33%), Positives = 54/100 (54%)
Frame = +1
Query: 1 GKPYNAMIVCTNIKSRSVASWNALIVGHLQLGQPMEALNLFVLMIEEKQKPDLISLANGI 180
GK +A ++ +K +++ SWNA+I G+ Q G P E+L LF + E + I++ +
Sbjct: 500 GKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVF 559
Query: 181 LCCADLGLLREGKSVQGYALRSGIELDIVTITALIDLYLK 300
C+ L LR GK GY L++ D ++ID+Y K
Sbjct: 560 GACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAK 599
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/110 (25%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +1
Query: 1 GKPYNAMIVCTNIKSRSVASWNALIVGHLQLGQPMEALNLFVLMIEEKQ-KPDLISLANG 177
G P ++ +V N++++++ WNAL+ G+ + G + + +F+ ++ + +PD + +
Sbjct: 93 GSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSV 152
Query: 178 ILCCADLGLLREGKSVQGYALRSGIELDIVTITALIDLYLKCDNTYTALK 327
I C + +R G+ + G ++ G+ LD+ AL+ +Y KC A+K
Sbjct: 153 IKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMK 202