BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00044213
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   117   7e-25
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   112   2e-23
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   108   3e-22
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   105   3e-21

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/100 (55%), Positives = 71/100 (71%)
 Frame = -2

Query: 456  MSKELRNILHKYKINQQLSEFDEGIVVAALFFHPRSSEKIGSGLKEIKIGLSSKSSTSRC 277
            +S+ L+ IL KY IN QLSE D+  ++ AL+FHPR  EKIG G + IK+   SK   +RC
Sbjct: 1388 LSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRC 1447

Query: 276  FLLVRTDDTIEDFSYHKCIHNGLKLIASKSAETYQSRWLS 157
            F LVRTD T EDFSYHKC+H  L++I  + A +YQSRWL+
Sbjct: 1448 FSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWLT 1487


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/99 (55%), Positives = 70/99 (70%)
 Frame = -2

Query: 456  MSKELRNILHKYKINQQLSEFDEGIVVAALFFHPRSSEKIGSGLKEIKIGLSSKSSTSRC 277
            +S+ L+ IL KY IN QLSE D+  ++ AL+FHPR  EKIG G + IK+   SK   +RC
Sbjct: 1246 LSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRC 1305

Query: 276  FLLVRTDDTIEDFSYHKCIHNGLKLIASKSAETYQSRWL 160
            F LVRTD T EDFSYHKC+H  L++I  + A +YQSRWL
Sbjct: 1306 FSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1344


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/99 (49%), Positives = 71/99 (71%)
 Frame = -2

Query: 456  MSKELRNILHKYKINQQLSEFDEGIVVAALFFHPRSSEKIGSGLKEIKIGLSSKSSTSRC 277
            +S  LR ILHKY +N++L+E D+  ++ AL+FHP   EKIG G ++IK+G  SK   +RC
Sbjct: 1366 LSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRC 1425

Query: 276  FLLVRTDDTIEDFSYHKCIHNGLKLIASKSAETYQSRWL 160
            F+L+R+D T EDFSYHKC+   L++IA    + YQS+W+
Sbjct: 1426 FVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWM 1464


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/102 (49%), Positives = 73/102 (71%)
 Frame = -2

Query: 456  MSKELRNILHKYKINQQLSEFDEGIVVAALFFHPRSSEKIGSGLKEIKIGLSSKSSTSRC 277
            MS  +R IL+KY ++QQL+E D+ +++  L+FHPR  EKIG G K+IK+    +   +RC
Sbjct: 1400 MSYTVRKILNKYSVDQQLNESDKSVLMMTLYFHPRRDEKIGIGAKDIKVINHPEYQDTRC 1459

Query: 276  FLLVRTDDTIEDFSYHKCIHNGLKLIASKSAETYQSRWLSGR 151
            F LVRTD TIEDFSY KC+HN L++IA + A+ Y  ++L+ +
Sbjct: 1460 FSLVRTDGTIEDFSYRKCLHNALEIIAPQRAKRYCEKYLTSK 1501


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/102 (51%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = -2

Query: 456  MSKELRNILHKYKINQQLSEFDEGIVVAALFFHPRSSEKIGSGL-KEIKIGLSSKSSTSR 280
            +S+ L+ +L KY I ++L+E D+ + + AL FHPR +EKIG G  KEIKIG   +   SR
Sbjct: 1036 LSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSR 1095

Query: 279  CFLLVRTDDTIEDFSYHKCIHNGLKLIASKSAETYQSRWLSG 154
            CF++VR+DDT+EDFSY KC+ + L+LIA + A+T  SRWL+G
Sbjct: 1096 CFMVVRSDDTVEDFSYRKCMQHALELIAPQKAKT--SRWLNG 1135