BLASTX nr result
ID: Angelica22_contig00044120
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00044120
(862 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 75 1e-23
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 75 2e-23
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 67 1e-19
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 62 2e-19
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 62 2e-19
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 75.5 bits (184), Expect(2) = 1e-23
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = -3
Query: 509 GPFMTWWDCNITNPKYRNLDRVLVNPACHGSFPLSTTVFLPRAFSDHCSISTTLGLHRKY 330
G TWW+ + T P + +DR+LVN + + FP S +F FSDH S L
Sbjct: 185 GNTFTWWNKSHTTPVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVVLEETSIK 244
Query: 329 QAKPFQFFSHLLEHLDFLKVVSDAWID-NVIEDFWFILTSKMKRTK 195
+PF+FF++LL++LDFL +V D W NV+ F ++ K+K K
Sbjct: 245 AKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALK 290
Score = 61.2 bits (147), Expect(2) = 1e-23
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = -1
Query: 850 GRIWVGWNPNIWDLFVISASLHHITCFVSLREHHASFFISFVYGFNTGWERRLIWSEL-- 677
G+IWV W+P++ + V++ SL ITC V L + +S VY N R+ +W E+
Sbjct: 69 GKIWVMWDPSV-QVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAANEVASRKELWIEIVN 127
Query: 676 SVLSHVIVDAPWILTGDFNSCSNIDE 599
V+S +I D PW++ GDFN N E
Sbjct: 128 MVVSGIIGDRPWLVLGDFNQVLNPQE 153
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 74.7 bits (182), Expect(3) = 2e-23
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = -3
Query: 509 GPFMTWWDCNITNPKYRNLDRVLVNPACHGSFPLSTTVFLPRAFSDHCSISTTLGLHRKY 330
G TWW+ + T P + +DR+LVN + FP S +F P FSDH S L L
Sbjct: 177 GSSFTWWNKSKTRPVAKKIDRILVNESWSNLFPSSFGLFGPPDFSDHASCGVVLELDPIK 236
Query: 329 QAKPFQFFSHLLEHLDFLKVVSDAWID-NVIEDFWFILTSKMKRTK 195
+PF+FF+ LL++ +FL +V D W NV+ F ++ K+K K
Sbjct: 237 AKRPFKFFNFLLKNPEFLNLVWDVWYSTNVVGSSMFRVSKKLKALK 282
Score = 59.7 bits (143), Expect(3) = 2e-23
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = -1
Query: 850 GRIWVGWNPNIWDLFVISASLHHITCFVSLREHHASFFISFVYGFNTGWERRLIWSELSV 671
G+IWV W+P++ ++ +++ SL ITC V IS VY N +R+ +W E++
Sbjct: 61 GKIWVLWDPSV-EVVIVAKSLQMITCEVLFPNSRTWIVISVVYAANEDDKRKELWREITA 119
Query: 670 L--SHVIVDAPWILTGDFN 620
L S V + PWIL GDFN
Sbjct: 120 LVASPVTFNRPWILLGDFN 138
Score = 21.6 bits (44), Expect(3) = 2e-23
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -1
Query: 118 FQSSMPFNPTVEQFESERSLIASFSVALLKEEHFLQQKS 2
FQ+ NP++E E + + EE F +Q+S
Sbjct: 310 FQNLTLDNPSLENAAHELEAQRKWQILATAEESFFRQRS 348
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 67.4 bits (163), Expect(2) = 1e-19
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = -1
Query: 850 GRIWVGWNPNIWDLFVISASLHHITCFVSLREHHASFFISFVYGFNTGWERRLIWSELSV 671
GRIWV W+P + ++ V+S S I+C V L F ++FVY N + RR +WSEL +
Sbjct: 68 GRIWVVWDPAV-EVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSELEL 126
Query: 670 L--SHVIVDAPWILTGDFN-SCSNIDEKQG 590
L + D PWI+ GDFN S +D G
Sbjct: 127 LAANQTTSDKPWIILGDFNQSLDPVDASTG 156
Score = 55.8 bits (133), Expect(2) = 1e-19
Identities = 27/85 (31%), Positives = 42/85 (49%)
Frame = -3
Query: 509 GPFMTWWDCNITNPKYRNLDRVLVNPACHGSFPLSTTVFLPRAFSDHCSISTTLGLHRKY 330
G TWW+ NP + +DR+LVN + + PLS F FSDHC +
Sbjct: 183 GNHYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGG 242
Query: 329 QAKPFQFFSHLLEHLDFLKVVSDAW 255
+ KPF+ + L+ H +F++ + W
Sbjct: 243 RNKPFKLSNFLMHHPEFIEKIRVTW 267
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 61.6 bits (148), Expect(2) = 2e-19
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = -1
Query: 850 GRIWVGWNPNIWDLFVISASLHHITCFVSLREHHASFFISFVYGFNTGWERRLIWSEL-- 677
G+IWV W+P++ + VI SL ITC + L + + F +S VY N R+ +W+EL
Sbjct: 69 GKIWVLWDPSV-KVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEGTRKELWNELVQ 127
Query: 676 SVLSHVIVDAPWILTGDFNSCSN 608
LS V+V WI+ GDFN N
Sbjct: 128 LALSPVVVGRSWIVLGDFNQILN 150
Score = 60.5 bits (145), Expect(2) = 2e-19
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = -3
Query: 509 GPFMTWWDCNITNPKYRNLDRVLVNPACHGSFPLSTTVFLPRAFSDHCSISTTLGLHRKY 330
G TWW+ + P + +DR+LVN + FP + F FSDH S L
Sbjct: 182 GSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLK 241
Query: 329 QAKPFQFFSHLLEHLDFLKVVSDAWID-NVIEDFWFILTSKMKRTKL 192
+PF+FF++ L + DFL+++ + W NV + ++ K+K KL
Sbjct: 242 AKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKL 288
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 61.6 bits (148), Expect(2) = 2e-19
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = -1
Query: 850 GRIWVGWNPNIWDLFVISASLHHITCFVSLREHHASFFISFVYGFNTGWERRLIWSEL-- 677
G+IWV W+P++ + VI SL ITC + L + + F +S VY N R+ +W+EL
Sbjct: 69 GKIWVLWDPSV-KVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEGTRKELWNELVQ 127
Query: 676 SVLSHVIVDAPWILTGDFNSCSN 608
LS V+V WI+ GDFN N
Sbjct: 128 LALSPVVVGRSWIVLGDFNQILN 150
Score = 60.5 bits (145), Expect(2) = 2e-19
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = -3
Query: 509 GPFMTWWDCNITNPKYRNLDRVLVNPACHGSFPLSTTVFLPRAFSDHCSISTTLGLHRKY 330
G TWW+ + P + +DR+LVN + FP + F FSDH S L
Sbjct: 182 GSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLK 241
Query: 329 QAKPFQFFSHLLEHLDFLKVVSDAWID-NVIEDFWFILTSKMKRTKL 192
+PF+FF++ L + DFL+++ + W NV + ++ K+K KL
Sbjct: 242 AKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKL 288