BLASTX nr result

ID: Angelica22_contig00044102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00044102
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago ...   107   2e-21
ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat...   103   1e-20
gb|AFK13844.1| cyclin domain/pentatricopeptide repeat-containing...   103   2e-20
ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat...   100   1e-19
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]    99   4e-19

>ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
           gi|355491760|gb|AES72963.1| hypothetical protein
           MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  107 bits (266), Expect = 2e-21
 Identities = 54/100 (54%), Positives = 63/100 (63%)
 Frame = +3

Query: 252 NDGLSLLRQKTRYSAVYNTDHHTLATLLKSCAAISDIKVGKTLHSQVVKLGHNSCQFVCK 431
           N+ LS      + SA +  DH  LA +LKSC+A+    +GK LHS VVK GH SC    K
Sbjct: 17  NEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSK 76

Query: 432 ALLNMYAKCNVFDDCLKLFRQNSSNDAVTWNIVLSGFSGS 551
           ALLNMYAKC + DDC KLF Q    D V WNIVLSG+S S
Sbjct: 77  ALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRS 116


>ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/100 (52%), Positives = 63/100 (63%)
 Frame = +3

Query: 252 NDGLSLLRQKTRYSAVYNTDHHTLATLLKSCAAISDIKVGKTLHSQVVKLGHNSCQFVCK 431
           ++ LSL     +    +  DH  LA +LKSC+A+    +G+TLH  VVK GH SC    K
Sbjct: 23  SEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNK 82

Query: 432 ALLNMYAKCNVFDDCLKLFRQNSSNDAVTWNIVLSGFSGS 551
            LLNMYAKC +  +CLKLF Q S  D V WNIVLSGFSGS
Sbjct: 83  GLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGS 122



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = +3

Query: 318 TLATLLKSCAAISDIKVGKTLHSQVVKLGHNSCQFVCKALLNMYAKCN-VFDDCLKLFRQ 494
           T+AT+L  CA + D+  GK +H  V+K G +       AL++MYAKC  V  D   +F  
Sbjct: 148 TVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDN 207

Query: 495 NSSNDAVTWNIVLSGFS 545
            +  D V+WN +++G +
Sbjct: 208 IAYKDVVSWNAMIAGLA 224


>gb|AFK13844.1| cyclin domain/pentatricopeptide repeat-containing protein [Beta
           vulgaris subsp. vulgaris]
          Length = 877

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/97 (55%), Positives = 61/97 (62%)
 Frame = +3

Query: 261 LSLLRQKTRYSAVYNTDHHTLATLLKSCAAISDIKVGKTLHSQVVKLGHNSCQFVCKALL 440
           L+L   K ++   +  DH  L T LKSCA IS + VG+ LHS VVKLGH SC  V K LL
Sbjct: 26  LNLFLSKLKHPFGFKPDHLVLQTALKSCATISSLNVGRALHSLVVKLGHISCLSVSKGLL 85

Query: 441 NMYAKCNVFDDCLKLFRQNSSNDAVTWNIVLSGFSGS 551
           N+YAK   FDDC KL  Q    D V WNIVLSG SGS
Sbjct: 86  NVYAKGKDFDDCKKLLYQMPKYDTVVWNIVLSGLSGS 122


>ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  100 bits (250), Expect = 1e-19
 Identities = 50/99 (50%), Positives = 61/99 (61%)
 Frame = +3

Query: 252 NDGLSLLRQKTRYSAVYNTDHHTLATLLKSCAAISDIKVGKTLHSQVVKLGHNSCQFVCK 431
           ++ LSL  ++ R S  Y  +   LA LLKSC AIS I+ G  LH   +KLGH SCQ +CK
Sbjct: 19  DEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCK 78

Query: 432 ALLNMYAKCNVFDDCLKLFRQNSSNDAVTWNIVLSGFSG 548
            LLN+YAK    D C KLF +    D V WNIVLSG +G
Sbjct: 79  GLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAG 117



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = +3

Query: 318 TLATLLKSCAAISDIKVGKTLHSQVVKLGHNSCQFVCKALLNMYAKCN-VFDDCLKLFRQ 494
           T+A +L  CA + +   GK++HS V+K G  S      AL++MYAKC  V  D    F +
Sbjct: 144 TIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNR 202

Query: 495 NSSNDAVTWNIVLSGFS 545
               D V+WN V++GFS
Sbjct: 203 IEFKDVVSWNAVIAGFS 219


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/99 (49%), Positives = 60/99 (60%)
 Frame = +3

Query: 252  NDGLSLLRQKTRYSAVYNTDHHTLATLLKSCAAISDIKVGKTLHSQVVKLGHNSCQFVCK 431
            ++ LSL  ++ R S  Y  +   LA LLKSC A S I+ G  LH   +KLGH SCQ +CK
Sbjct: 951  DEALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCK 1010

Query: 432  ALLNMYAKCNVFDDCLKLFRQNSSNDAVTWNIVLSGFSG 548
             LLN+YAK    D C KLF +    D V WNIVLSG +G
Sbjct: 1011 GLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAG 1049



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = +3

Query: 318  TLATLLKSCAAISDIKVGKTLHSQVVKLGHNSCQFVCKALLNMYAKCN-VFDDCLKLFRQ 494
            T+A +L  CA + +   GK++HS V+K G  S      AL++MYAKC  V  D    F +
Sbjct: 1076 TIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNR 1134

Query: 495  NSSNDAVTWNIVLSGFS 545
                D V+WN V++GFS
Sbjct: 1135 IEFKDVVSWNAVIAGFS 1151


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