BLASTX nr result

ID: Angelica22_contig00044058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00044058
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_002531869.1| pentatricopeptide repeat-containing protein,...   143   2e-32
ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_003625900.1| Pentatricopeptide repeat-containing protein ...   138   5e-31

>ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 468

 Score =  150 bits (378), Expect = 1e-34
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = -1

Query: 261 RDVVSWTAMISGYREAKRFDDALVVFEQMQYAGVEPNRVTMVNALSACASFGAIDMGVWI 82
           RDVVSWT +I+GYR A+R+DDAL+ FEQMQYAGV PN VTMVNALSACA FGA++MGVWI
Sbjct: 173 RDVVSWTVLITGYRSAERYDDALIAFEQMQYAGVVPNHVTMVNALSACADFGALEMGVWI 232

Query: 81  HDFIRRNEWELDVKLGTCLVDMYGKCG 1
           H+FIRR+ WE DV LGT L+DMYGKCG
Sbjct: 233 HEFIRRSGWEFDVILGTSLIDMYGKCG 259


>ref|XP_002531869.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528477|gb|EEF30506.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 242

 Score =  143 bits (360), Expect = 2e-32
 Identities = 63/88 (71%), Positives = 73/88 (82%)
 Frame = -1

Query: 264 ERDVVSWTAMISGYREAKRFDDALVVFEQMQYAGVEPNRVTMVNALSACASFGAIDMGVW 85
           ERDVVSWT +I GYR A+ + DAL+ FEQMQYAG+ PN VTMVN L ACA FGAI+MG+W
Sbjct: 3   ERDVVSWTVLIMGYRNAENYGDALIAFEQMQYAGIVPNHVTMVNVLGACARFGAIEMGIW 62

Query: 84  IHDFIRRNEWELDVKLGTCLVDMYGKCG 1
           IHDFIRR+ WE+DV LGT L+DMY KCG
Sbjct: 63  IHDFIRRSGWEIDVILGTSLIDMYAKCG 90


>ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/86 (73%), Positives = 75/86 (87%)
 Frame = -1

Query: 258 DVVSWTAMISGYREAKRFDDALVVFEQMQYAGVEPNRVTMVNALSACASFGAIDMGVWIH 79
           DVVSWT +I GYR +   DDAL+VFEQMQYAGV+PNRVT+VNAL+ACASFGAI+MGVWIH
Sbjct: 175 DVVSWTILIMGYRVSFMLDDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIH 234

Query: 78  DFIRRNEWELDVKLGTCLVDMYGKCG 1
           +F++   WE+DV LGT L+DMYGKCG
Sbjct: 235 EFVKTKRWEVDVVLGTALIDMYGKCG 260


>ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/86 (73%), Positives = 75/86 (87%)
 Frame = -1

Query: 258 DVVSWTAMISGYREAKRFDDALVVFEQMQYAGVEPNRVTMVNALSACASFGAIDMGVWIH 79
           DVVSWT +I GYR +   DDAL+VFEQMQYAGV+PNRVT+VNAL+ACASFGAI+MGVWIH
Sbjct: 175 DVVSWTILIMGYRVSFMLDDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIH 234

Query: 78  DFIRRNEWELDVKLGTCLVDMYGKCG 1
           +F++   WE+DV LGT L+DMYGKCG
Sbjct: 235 EFVKTKRWEVDVVLGTALIDMYGKCG 260


>ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500915|gb|AES82118.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 467

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = -1

Query: 264 ERDVVSWTAMISGYREAKRFDDALVVFEQMQYAGVEPNRVTMVNALSACASFGAIDMGVW 85
           +RDVVSWT MI GYR   +++DAL+VFEQMQY GV PNRVTMVNALSACAS  AI+MGVW
Sbjct: 172 QRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVW 231

Query: 84  IHDFIRRNEWELDVKLGTCLVDMYGKCG 1
           I D +RRN WELDV LGT L+DMY KCG
Sbjct: 232 IDDMVRRNGWELDVILGTALIDMYVKCG 259


Top