BLASTX nr result

ID: Angelica22_contig00043992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043992
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   170   1e-40
emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]   162   2e-38
emb|CBI16626.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   155   3e-36
ref|XP_002468705.1| hypothetical protein SORBIDRAFT_01g050540 [S...   146   1e-33

>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
           vinifera]
          Length = 876

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/110 (74%), Positives = 96/110 (87%), Gaps = 2/110 (1%)
 Frame = +1

Query: 4   KLIAAAKTIVAGDS--DDIPINFSDIGIRATLKPHQVEGLSWLIRRYLLGVNVILGDEMG 177
           +LIAAAK ++ GD+  +D P+N+ + G+ ATLKPHQVEG+SWLIRRYLLGVNV+LGDEMG
Sbjct: 6   RLIAAAKLVLDGDARAEDAPVNWGEFGVTATLKPHQVEGVSWLIRRYLLGVNVVLGDEMG 65

Query: 178 LGKTLQAISFLSYLKACRNIPGPFLVLCPLSVTDGWVSETARFAPKLRLL 327
           LGKTLQAISFLSY+K  +  PGPFLVLCPLSVTDGWVSE A FAPKLR+L
Sbjct: 66  LGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVL 115


>emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
          Length = 1054

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/118 (69%), Positives = 96/118 (81%), Gaps = 10/118 (8%)
 Frame = +1

Query: 4   KLIAAAKTIVAGDS--DDIPINFSDIGIRATLKPHQVEGLSWLIRRYLLGVNVILG---- 165
           +LIAAAK ++ GD+  +D P+N+ + G+ ATLKPHQVEG+SWLIRRYLLGVNV+LG    
Sbjct: 6   RLIAAAKLVLDGDARAEDAPVNWGEFGVTATLKPHQVEGVSWLIRRYLLGVNVVLGRVFI 65

Query: 166 ----DEMGLGKTLQAISFLSYLKACRNIPGPFLVLCPLSVTDGWVSETARFAPKLRLL 327
               DEMGLGKTLQAISFLSY+K  +  PGPFLVLCPLSVTDGWVSE A FAPKLR+L
Sbjct: 66  VYAGDEMGLGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVL 123


>emb|CBI16626.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/110 (72%), Positives = 94/110 (85%), Gaps = 2/110 (1%)
 Frame = +1

Query: 4   KLIAAAKTIVAGDS--DDIPINFSDIGIRATLKPHQVEGLSWLIRRYLLGVNVILGDEMG 177
           +LIAAAK ++ GD+  +D P+N+ + G+ ATLKPHQVEG+SWLIRRYLLGVNV+LG  MG
Sbjct: 6   RLIAAAKLVLDGDARAEDAPVNWGEFGVTATLKPHQVEGVSWLIRRYLLGVNVVLG-RMG 64

Query: 178 LGKTLQAISFLSYLKACRNIPGPFLVLCPLSVTDGWVSETARFAPKLRLL 327
           LGKTLQAISFLSY+K  +  PGPFLVLCPLSVTDGWVSE A FAPKLR+L
Sbjct: 65  LGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVL 114


>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
           helicase, putative [Ricinus communis]
          Length = 860

 Score =  155 bits (392), Expect = 3e-36
 Identities = 76/110 (69%), Positives = 91/110 (82%), Gaps = 2/110 (1%)
 Frame = +1

Query: 4   KLIAAAKTIVAGDS--DDIPINFSDIGIRATLKPHQVEGLSWLIRRYLLGVNVILGDEMG 177
           +++ AA  I+  D+  DD+ IN ++IG+ ATLKPHQVEG+ WLIRRYLLGVNVILGDEMG
Sbjct: 6   RIMTAASIIIDADARADDVTINAAEIGVTATLKPHQVEGVFWLIRRYLLGVNVILGDEMG 65

Query: 178 LGKTLQAISFLSYLKACRNIPGPFLVLCPLSVTDGWVSETARFAPKLRLL 327
           LGKTLQA+ FLSYLKA +   GPFLVLCPLSVTDGW+SE A+F PKL+ L
Sbjct: 66  LGKTLQAVCFLSYLKAQQISAGPFLVLCPLSVTDGWISEMAKFTPKLKAL 115


>ref|XP_002468705.1| hypothetical protein SORBIDRAFT_01g050540 [Sorghum bicolor]
           gi|241922559|gb|EER95703.1| hypothetical protein
           SORBIDRAFT_01g050540 [Sorghum bicolor]
          Length = 194

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/108 (63%), Positives = 85/108 (78%)
 Frame = +1

Query: 4   KLIAAAKTIVAGDSDDIPINFSDIGIRATLKPHQVEGLSWLIRRYLLGVNVILGDEMGLG 183
           +L+AAA  +++ D+ D      D+G+ A LKPHQ+ G++WLIRRY LGVNV+LGDEMGLG
Sbjct: 11  RLLAAADLVLSADAQDQGTRLPDLGVTADLKPHQLHGVAWLIRRYRLGVNVVLGDEMGLG 70

Query: 184 KTLQAISFLSYLKACRNIPGPFLVLCPLSVTDGWVSETARFAPKLRLL 327
           KTLQAIS LSYLK  R  PGPFLVLCPLSVTDGW+SE ++F P  R+L
Sbjct: 71  KTLQAISLLSYLKIQRIAPGPFLVLCPLSVTDGWLSEFSKFCPSFRVL 118


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