BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043966
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    50   2e-12
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    59   2e-10
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...    52   1e-09
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    51   4e-09
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    51   9e-09

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 50.1 bits (118), Expect(2) = 2e-12
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +2

Query: 2   LKIDSKEWDEEILSDMFQSRDHTIIMGIPLSNCQEDDNWYWSKD 133
           L+I+ + WD +IL D+F  RD  +I  IPL+N   +D+WYW  D
Sbjct: 359 LQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFD 402



 Score = 46.6 bits (109), Expect(2) = 2e-12
 Identities = 21/54 (38%), Positives = 29/54 (53%)
 Frame = +1

Query: 139 GIYTVRSAYRYLQELKGEVHVVNNSGFWRKLWNLKIPPKVKKILWRASRGCLPT 300
           G Y V++ YR LQ   G       + FW K W LKIP KV+ ++W+    C+ T
Sbjct: 405 GNYLVKNCYRLLQGDLGRPE----TSFWNKFWKLKIPTKVRNLMWKICSNCIRT 454


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 58.5 bits (140), Expect(2) = 2e-10
 Identities = 25/56 (44%), Positives = 34/56 (60%)
 Frame = +1

Query: 136 SGIYTVRSAYRYLQELKGEVHVVNNSGFWRKLWNLKIPPKVKKILWRASRGCLPTR 303
           +G YTV+SAYR   +L       +N+  W  +WNL IP +V+  LWR +  CLPTR
Sbjct: 87  TGNYTVKSAYRICSDLLHPHDSAHNNSSWMNIWNLNIPHRVRAFLWRLAHNCLPTR 142



 Score = 31.2 bits (69), Expect(2) = 2e-10
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 2   LKIDSKEWDEEILSDMFQSRDHTIIMGIPLSNCQEDDNWYW 124
           L ++   W+++I++ +F  +D   I+ IPL N    D   W
Sbjct: 42  LNLEGLSWNQQIVTSIFNPQDAAAILSIPLHNRLLSDTRIW 82


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score = 52.4 bits (124), Expect(2) = 1e-09
 Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
 Frame = +1

Query: 139 GIYTVRSAYRYLQELKGEVHVVNNSGFWR------KLWNLKIPPKVKKILWRASRGCLPT 300
           G+Y+V++AYR        V V+ N   W+      KLW+L IPPKVK  +WR  R CLP 
Sbjct: 578 GVYSVKNAYRVC------VDVLINRDEWKVEGDRNKLWSLPIPPKVKHFMWRLGRDCLPN 631

Query: 301 R 303
           R
Sbjct: 632 R 632



 Score = 35.0 bits (79), Expect(2) = 1e-09
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +2

Query: 14  SKEWDEEILSDMFQSRDHTIIMGIPLSNCQEDDNWYWSKDK 136
           ++ W+E ++ + F  RD   I+ IPL +C+++D   W  DK
Sbjct: 536 TRSWNEPLIRNNFNLRDVDEILKIPLLHCEQNDAIIWRFDK 576


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 51.2 bits (121), Expect(2) = 4e-09
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = +1

Query: 139 GIYTVRSAYRYLQELKGEVHVV----NNSGFWRKLWNLKIPPKVKKILWRASRGCLPTRF 306
           G YT RS Y  L+  +    +V    +++  W +LW +  PPK+    WRA+R CLPTRF
Sbjct: 477 GEYTARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRF 536



 Score = 34.3 bits (77), Expect(2) = 4e-09
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 23  WDEEILSDMFQSRDHTIIMGIPLSNCQEDDNWYWSKD 133
           W E+ + D F +RD  +I+ IPL     +D   WS D
Sbjct: 438 WREDFIRDKFMARDADLILSIPLPMSSREDQISWSFD 474


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 51.2 bits (121), Expect(2) = 9e-09
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = +1

Query: 139  GIYTVRSAYRYLQELKGEVHVV----NNSGFWRKLWNLKIPPKVKKILWRASRGCLPTRF 306
            G YT RS Y  L+  +    +V    +++  W +LW +  PPK+    WRA+R CLPTRF
Sbjct: 1207 GEYTARSGYGALRCFRQSAALVASDVDSNFVWAQLWKVTTPPKILNFAWRAARNCLPTRF 1266



 Score = 33.1 bits (74), Expect(2) = 9e-09
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 23   WDEEILSDMFQSRDHTIIMGIPLSNCQEDDNWYWSKD 133
            W E+ + D F +RD  +I+ IPL     +D   WS D
Sbjct: 1168 WREDFIRDKFMARDADLILYIPLPMSSREDQISWSFD 1204