BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043962
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   181   7e-44
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            179   3e-43
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   175   4e-42
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   174   9e-42
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   174   9e-42

>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  181 bits (458), Expect = 7e-44
 Identities = 88/149 (59%), Positives = 105/149 (70%)
 Frame = +3

Query: 6    FDLIHVDLWGPYAHETYNGCKYFLTIVDDSSRAVWTFLLPSK*HVFHQLTCFLAYVSTHF 185
            F+L+H DLWGPY   +  G +YFLT+VDD SRAVW +LLPSK      L  F+A V   +
Sbjct: 561  FELVHCDLWGPYRTTSICGSRYFLTLVDDYSRAVWLYLLPSKQEAPKHLKNFIALVERQY 620

Query: 186  HTNVKVFRSDNGIEFFNNSLISFLLTKGISHQSSCVNTPVQNGRVERKHRQLLAIARSLR 365
             TN+K+ RSDNG EF    L  F   KGI H++SCV TP QNGRVERKHR +L +AR+LR
Sbjct: 621  TTNIKMIRSDNGSEFI--CLSDFFAQKGIIHETSCVGTPQQNGRVERKHRHILNVARALR 678

Query: 366  FQSGLPIRFWGDCLLTATYIINRLPTPVL 452
            FQSGLPI FW  C LTA Y+INR PTP+L
Sbjct: 679  FQSGLPIEFWSYCALTAAYLINRTPTPLL 707


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  179 bits (453), Expect = 3e-43
 Identities = 84/150 (56%), Positives = 105/150 (70%)
 Frame = +3

Query: 3   IFDLIHVDLWGPYAHETYNGCKYFLTIVDDSSRAVWTFLLPSK*HVFHQLTCFLAYVSTH 182
           +FDLIH D+WGPY   T++G +YFLT+VDD SR +W FLL  K  VF  L  FL  +   
Sbjct: 319 VFDLIHADVWGPYKFPTHDGNRYFLTLVDDCSRMIWIFLLKYKSDVFIVLKDFLQLIQRQ 378

Query: 183 FHTNVKVFRSDNGIEFFNNSLISFLLTKGISHQSSCVNTPVQNGRVERKHRQLLAIARSL 362
           F   +K+FRSDNG EFFN+       T GI HQSSCV TP QNG VER+HRQ+L +AR++
Sbjct: 379 FGGYIKIFRSDNGTEFFNSHCSELFRTAGIVHQSSCVYTPQQNGVVERRHRQILEVARAI 438

Query: 363 RFQSGLPIRFWGDCLLTATYIINRLPTPVL 452
           RFQ+ LPIRFWG C+  A Y+INR+P+  L
Sbjct: 439 RFQANLPIRFWGLCVQNAVYLINRIPSTAL 468


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  175 bits (443), Expect = 4e-42
 Identities = 83/149 (55%), Positives = 106/149 (71%)
 Frame = +3

Query: 6    FDLIHVDLWGPYAHETYNGCKYFLTIVDDSSRAVWTFLLPSK*HVFHQLTCFLAYVSTHF 185
            F LIH D+WGPY   +Y+G +YFLTIVDD SR VW +L+  K      L  F+A V   F
Sbjct: 571  FQLIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQF 630

Query: 186  HTNVKVFRSDNGIEFFNNSLISFLLTKGISHQSSCVNTPVQNGRVERKHRQLLAIARSLR 365
             T +K+ RSDNG EF    +  + L KGI+H++SCV TP QNGRVERKHR +L IAR+LR
Sbjct: 631  DTEIKIVRSDNGTEFL--CMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARALR 688

Query: 366  FQSGLPIRFWGDCLLTATYIINRLPTPVL 452
            FQS LPI+FWG+C+L+A Y+INR P+ +L
Sbjct: 689  FQSYLPIQFWGECILSAAYLINRTPSMLL 717


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/149 (55%), Positives = 105/149 (70%)
 Frame = +3

Query: 6   FDLIHVDLWGPYAHETYNGCKYFLTIVDDSSRAVWTFLLPSK*HVFHQLTCFLAYVSTHF 185
           F LIH D+WGPY   +Y+G +YFLTIVDD SR VW +L+  K      L  F+A V   F
Sbjct: 347 FQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQF 406

Query: 186 HTNVKVFRSDNGIEFFNNSLISFLLTKGISHQSSCVNTPVQNGRVERKHRQLLAIARSLR 365
            T +K  RSDNG EF    +  + L KGI+H++SCV TP QNGRVERKHR +L IAR+LR
Sbjct: 407 DTEIKTVRSDNGTEFL--CMREYFLHKGITHETSCVGTPHQNGRVERKHRHILNIARALR 464

Query: 366 FQSGLPIRFWGDCLLTATYIINRLPTPVL 452
           FQS LPI+FWG+C+L+A Y+INR P+ +L
Sbjct: 465 FQSYLPIQFWGECILSAAYLINRTPSMLL 493


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/149 (55%), Positives = 105/149 (70%)
 Frame = +3

Query: 6   FDLIHVDLWGPYAHETYNGCKYFLTIVDDSSRAVWTFLLPSK*HVFHQLTCFLAYVSTHF 185
           F LIH D+WGPY   +Y+G +YFLTIVDD SR VW +L+  K      L  F+A V   F
Sbjct: 347 FQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQF 406

Query: 186 HTNVKVFRSDNGIEFFNNSLISFLLTKGISHQSSCVNTPVQNGRVERKHRQLLAIARSLR 365
            T +K  RSDNG EF    +  + L KGI+H++SCV TP QNGRVERKHR +L IAR+LR
Sbjct: 407 DTEIKTVRSDNGTEFL--CMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARALR 464

Query: 366 FQSGLPIRFWGDCLLTATYIINRLPTPVL 452
           FQS LPI+FWG+C+L+A Y+INR P+ +L
Sbjct: 465 FQSYLPIQFWGECILSAAYLINRTPSMLL 493