BLASTX nr result

ID: Angelica22_contig00043801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043801
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   102   4e-20
gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]      92   2e-19
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    86   4e-18
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    86   1e-17
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...    82   4e-17

>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/119 (43%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
 Frame = -2

Query: 339 LGPPFIVRCSV*KSVFNLLKE------TNLSSKLLSKGGKAILLKSVAHAVPSYGLSCFF 178
           LG P ++  S  KS+FN +K+      + LSSK+LS+ GK +L+KSVA A+PSY +S F 
Sbjct: 343 LGLPSMIGRSK-KSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFL 401

Query: 177 IPKSLCIEMERMLNGYWWNSNSTNNKGIRWLS*ENMSMSKCKGGSDLCDLHGFNLALLG 1
           +P S+  ++E+MLN +WW   +    GIRW+S E ++M K  GG     +HGF+LA+ G
Sbjct: 402 LPHSIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTMRKEWGGMGFRHIHGFDLAMSG 460


>gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1264

 Score = 92.0 bits (227), Expect(2) = 2e-19
 Identities = 44/86 (51%), Positives = 59/86 (68%)
 Frame = -2

Query: 261  KLLSKGGKAILLKSVAHAVPSYGLSCFFIPKSLCIEMERMLNGYWWNSNSTNNKGIRWLS 82
            KLLSK GK IL+K+VA A+P+Y +SCF + K LC E+  M++ +WW+ N   NK I WLS
Sbjct: 1130 KLLSKAGKEILVKAVAQAIPTYAMSCFDLTKGLCDEINSMISKWWWSQNDKENK-IHWLS 1188

Query: 81   *ENMSMSKCKGGSDLCDLHGFNLALL 4
             E M++ K  GG    DLH FN+A+L
Sbjct: 1189 WEKMTLPKKLGGPGFRDLHLFNMAML 1214



 Score = 28.5 bits (62), Expect(2) = 2e-19
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 425  IFFSAN-VRCDKQEIKKILGVQNDIRDSKYLGLP 327
            + FS N ++ D+ E++  L +  + ++ +YLGLP
Sbjct: 1069 VLFSPNTLQSDRMEVRSALCINQEAKNERYLGLP 1102


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 85.5 bits (210), Expect(2) = 4e-18
 Identities = 40/88 (45%), Positives = 57/88 (64%)
 Frame = -2

Query: 264 SKLLSKGGKAILLKSVAHAVPSYGLSCFFIPKSLCIEMERMLNGYWWNSNSTNNKGIRWL 85
           SKLLS+ GK IL+K V  A+PSY +S F +P SL  E+++M+N +WW   S   + I WL
Sbjct: 182 SKLLSQAGKKILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKSDGGRRINWL 241

Query: 84  S*ENMSMSKCKGGSDLCDLHGFNLALLG 1
           S + + + K +GG    +L  FNLA+LG
Sbjct: 242 SWDKLCLRKEEGGLGFRNLRDFNLAMLG 269



 Score = 30.4 bits (67), Expect(2) = 4e-18
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 425 IFFSANVRC-DKQEIKKILGVQNDIRDSKYLGLPSLFAVRYRNLY 294
           IFFS N    D+  I  ILGV   +   +YLGL SL     R ++
Sbjct: 122 IFFSKNASSLDRDFISNILGVSTPLNTGRYLGLLSLIGKSKRVVF 166


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 86.3 bits (212), Expect(2) = 1e-17
 Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
 Frame = -2

Query: 300 SVFNLLKET------NLSSKLLSKGGKAILLKSVAHAVPSYGLSCFFIPKSLCIEMERML 139
           ++F+ LK+       + S + LS+  K +L+KSVA A+PSY +  F IP SLC E+ERM+
Sbjct: 294 AIFSYLKDRIWKKCQSWSVRSLSRADKEVLIKSVAQAIPSYCMGAFLIPASLCEELERMM 353

Query: 138 NGYWWNSNSTNNKGIRWLS*ENMSMSKCKGGSDLCDLHGFNLALLG 1
           N ++W S     +GI W+  + +++ K  GG    +L  FNL++LG
Sbjct: 354 NSFYWGSKKNGRRGINWMRWDFLTLHKSLGGLGFRNLEAFNLSMLG 399



 Score = 28.5 bits (62), Expect(2) = 1e-17
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 374 LGVQNDIRDSKYLGLPSL 321
           LGV N+I   KYLGLPS+
Sbjct: 270 LGVHNNIGSGKYLGLPSM 287


>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score = 82.0 bits (201), Expect(2) = 4e-17
 Identities = 41/86 (47%), Positives = 58/86 (67%)
 Frame = -2

Query: 261 KLLSKGGKAILLKSVAHAVPSYGLSCFFIPKSLCIEMERMLNGYWWNSNSTNNKGIRWLS 82
           KLLSK GK IL+K+VA A+P++ +SCF + K+LC E+  ++  Y+W+   T NK + WLS
Sbjct: 457 KLLSKAGKDILIKAVAQAIPTFAMSCFDLTKTLCDEISAIICRYFWSQQETENK-MHWLS 515

Query: 81  *ENMSMSKCKGGSDLCDLHGFNLALL 4
            + +   K KGG    DLH FNLA+L
Sbjct: 516 WDLLCRRKKKGGLGYRDLHLFNLAML 541



 Score = 30.8 bits (68), Expect(2) = 4e-17
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -3

Query: 425 IFFSANV-RCDKQEIKKILGVQNDIRDSKYLGLP 327
           I FS N  + D++ + +IL +  + R+ KYLGLP
Sbjct: 396 IMFSKNTSQADRKMVMEILDISTEARNEKYLGLP 429


Top