BLASTX nr result

ID: Angelica22_contig00043731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043731
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1...   140   2e-31
ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]    140   2e-31
dbj|BAE71211.1| putative DNA ligase [Trifolium pratense]              136   3e-30
ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera] gi|...   133   3e-29
ref|XP_002314303.1| predicted protein [Populus trichocarpa] gi|2...   133   3e-29

>ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cucumis sativus]
          Length = 801

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/93 (72%), Positives = 78/93 (83%)
 Frame = +1

Query: 1   SYYRYTD*KNPDVWFEATEVWEVKAADLTISPFYCAAIGIVDSGKGISLRHPRLVRLRED 180
           SYYRY D  NPDVWFE TEVWEVKAADLTISP + A +GIVDS KGISLR PRLVR+RED
Sbjct: 709 SYYRYGDTINPDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVRED 768

Query: 181 KTPQQASSSDMVADMYNAQKHTQKDIEDNNEDE 279
           K P++ASSS+ VADMYNAQKH  ++ +D+N D+
Sbjct: 769 KNPEEASSSEQVADMYNAQKHNHQNNQDDNGDD 801


>ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]
          Length = 801

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/93 (72%), Positives = 78/93 (83%)
 Frame = +1

Query: 1   SYYRYTD*KNPDVWFEATEVWEVKAADLTISPFYCAAIGIVDSGKGISLRHPRLVRLRED 180
           SYYRY D  NPDVWFE TEVWEVKAADLTISP + A +GIVDS KGISLR PRLVR+RED
Sbjct: 709 SYYRYGDTINPDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVRED 768

Query: 181 KTPQQASSSDMVADMYNAQKHTQKDIEDNNEDE 279
           K P++ASSS+ VADMYNAQKH  ++ +D+N D+
Sbjct: 769 KNPEEASSSEQVADMYNAQKHNHQNNQDDNGDD 801


>dbj|BAE71211.1| putative DNA ligase [Trifolium pratense]
          Length = 682

 Score =  136 bits (343), Expect = 3e-30
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = +1

Query: 1   SYYRYTD*KNPDVWFEATEVWEVKAADLTISPFYCAAIGIVDSGKGISLRHPRLVRLRED 180
           SYY+Y +  NPDVWFEA+EVWEVKAADLTISP Y AA+G VDS KGISLR PRLVR+R D
Sbjct: 590 SYYQYGESTNPDVWFEASEVWEVKAADLTISPVYRAAVGKVDSNKGISLRFPRLVRVRPD 649

Query: 181 KTPQQASSSDMVADMYNAQKHTQKDIEDNNEDE 279
           K P+QASSS+ VA+MY AQKH   D +D+ ED+
Sbjct: 650 KAPEQASSSEQVAEMYTAQKHNHNDKQDDEEDD 682


>ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera]
           gi|297734904|emb|CBI17138.3| unnamed protein product
           [Vitis vinifera]
          Length = 723

 Score =  133 bits (335), Expect = 3e-29
 Identities = 63/92 (68%), Positives = 75/92 (81%)
 Frame = +1

Query: 4   YYRYTD*KNPDVWFEATEVWEVKAADLTISPFYCAAIGIVDSGKGISLRHPRLVRLREDK 183
           YYRY D  +PDVWFE TEVWEVKAADLTISP + AA+GIVD  KGISLR PRLVR+R+DK
Sbjct: 632 YYRYADSIDPDVWFEPTEVWEVKAADLTISPVHRAAVGIVDPNKGISLRFPRLVRIRDDK 691

Query: 184 TPQQASSSDMVADMYNAQKHTQKDIEDNNEDE 279
            P+QASSSD+VA+MYN QK   +  +D NE++
Sbjct: 692 NPEQASSSDLVAEMYNGQKLNHQSNQDENEED 723


>ref|XP_002314303.1| predicted protein [Populus trichocarpa] gi|222850711|gb|EEE88258.1|
           predicted protein [Populus trichocarpa]
          Length = 684

 Score =  133 bits (335), Expect = 3e-29
 Identities = 64/93 (68%), Positives = 77/93 (82%)
 Frame = +1

Query: 1   SYYRYTD*KNPDVWFEATEVWEVKAADLTISPFYCAAIGIVDSGKGISLRHPRLVRLRED 180
           SYYR+ D   PDVWFE  EVWEVKAADLTISP + AAIG VD  KGISLR PRLVR+RED
Sbjct: 591 SYYRFGDTIKPDVWFEPKEVWEVKAADLTISPVHRAAIGEVDPNKGISLRFPRLVRVRED 650

Query: 181 KTPQQASSSDMVADMYNAQKHTQKDIEDNNEDE 279
           K+P+QASSS+ VA+MYNAQKH  ++ +D+N+D+
Sbjct: 651 KSPEQASSSEQVAEMYNAQKHNHQNNQDDNDDD 683


Top