BLASTX nr result

ID: Angelica22_contig00043651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043651
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519945.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]   125   3e-27
gb|AFK33630.1| unknown [Lotus japonicus]                              124   6e-27
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26

>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/105 (56%), Positives = 80/105 (76%)
 Frame = +1

Query: 1   REMVREGVKRNSFTYSSVLKACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSK 180
           +EM   G+KRNSFT SSVL+AC R+GDGG CG+QVH   IK G+ S + VQCGL+ MY K
Sbjct: 275 KEMGEAGIKRNSFTVSSVLRACARMGDGGNCGKQVHVIVIKLGLESDAFVQCGLIAMYGK 334

Query: 181 VGLVRYAKRVFDMNEDRKNGACWNAMLRGYMKDGDYIEAIKILYQ 315
            G++R AK+VF++  D+ N ACWNA+L  Y+++  +IEA+K+LYQ
Sbjct: 335 CGMIRKAKKVFELVIDKTNTACWNALLMAYVRNELFIEAMKLLYQ 379


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/106 (60%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
 Frame = +1

Query: 4   EMVREGVKRNSFTYSSVLKACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSKV 183
           EM R GVKRN FTYSSVL+AC R+ D G+CG  +HA  IK G+ S   VQCGLVDMY K 
Sbjct: 275 EMGRAGVKRNEFTYSSVLRACGRMKDHGRCGRLIHASTIKLGLESDIYVQCGLVDMYGKC 334

Query: 184 GLVRYAKRVFDMNED--RKNGACWNAMLRGYMKDGDYIEAIKILYQ 315
           GL+  A+RVF+   D  + N  CWNAML GY++ G YIEAIK LYQ
Sbjct: 335 GLLVEARRVFETVSDTNKTNIVCWNAMLTGYIRHGLYIEAIKFLYQ 380


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/106 (60%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
 Frame = +1

Query: 4   EMVREGVKRNSFTYSSVLKACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSKV 183
           EM R GVKRN FTYSSVL+AC R+ D G+CG  +HA  IK G+ S   VQCGLVDMY K 
Sbjct: 404 EMGRAGVKRNEFTYSSVLRACGRMKDHGRCGRLIHASTIKLGLESDIYVQCGLVDMYGKC 463

Query: 184 GLVRYAKRVFDMNED--RKNGACWNAMLRGYMKDGDYIEAIKILYQ 315
           GL+  A+RVF+   D  + N  CWNAML GY++ G YIEAIK LYQ
Sbjct: 464 GLLVEARRVFETVSDTNKTNIVCWNAMLTGYIRHGLYIEAIKFLYQ 509


>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/105 (53%), Positives = 81/105 (77%)
 Frame = +1

Query: 1   REMVREGVKRNSFTYSSVLKACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSK 180
           +EM R+G+K++++T+SSVLKAC ++ D G+CGEQVHA A+K G+ S + VQC L+ MY +
Sbjct: 223 KEMGRQGIKKDTYTFSSVLKACGKMMDHGRCGEQVHADAMKLGLASDNYVQCSLIAMYGR 282

Query: 181 VGLVRYAKRVFDMNEDRKNGACWNAMLRGYMKDGDYIEAIKILYQ 315
            GL+R AK+VF+ +   +N   WNAML GY+++G YIEA+K LYQ
Sbjct: 283 SGLLRDAKQVFETSRSERNVDSWNAMLMGYLENGLYIEAVKFLYQ 327


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/105 (55%), Positives = 78/105 (74%)
 Frame = +1

Query: 1   REMVREGVKRNSFTYSSVLKACRRLGDGGQCGEQVHAHAIKFGVVSKSNVQCGLVDMYSK 180
           +EM   GVK++ FT+SSVLKAC R+ +  +CGEQVH  AIK G+VS   VQC L+ MY +
Sbjct: 290 KEMGMRGVKKDCFTFSSVLKACGRMLNQERCGEQVHVDAIKLGLVSDHYVQCSLIAMYGR 349

Query: 181 VGLVRYAKRVFDMNEDRKNGACWNAMLRGYMKDGDYIEAIKILYQ 315
            GL+  AKRVF+M+++ +   CWNAML GY+++G YIEA+K LYQ
Sbjct: 350 CGLLEDAKRVFEMSQEERKVDCWNAMLMGYIQNGLYIEAVKFLYQ 394


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