BLASTX nr result

ID: Angelica22_contig00043584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043584
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]    71   8e-11
ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation ...    70   2e-10
ref|XP_002317604.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002532827.1| mitochondrial translational initiation facto...    63   3e-08
ref|XP_004151183.1| PREDICTED: translation initiation factor IF-...    62   5e-08

>emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]
          Length = 1005

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/97 (44%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = +2

Query: 35  AFKKTKTLKSVWRKGNPVATVEKVVKRQPKNVNVDKGELTTI----TVEKVEXXXXXXXX 202
           A KK+KTLKSVWRKGNPVATVEKVVK    N+   + E   I    T   +         
Sbjct: 182 ASKKSKTLKSVWRKGNPVATVEKVVKDASNNITNTEREGPEIPLRPTQPPLRAQPKLQAK 241

Query: 203 XXXXTLKPVIKRPVILIDVGATTKSPAVETTSAAKAK 313
                  PV+K+PVIL DVGA  KS  ++ T + K +
Sbjct: 242 PSVAPPPPVLKKPVILKDVGAAPKSSGIDETDSGKTR 278


>ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-2,
           chloroplastic-like [Vitis vinifera]
          Length = 1047

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/108 (41%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
 Frame = +2

Query: 35  AFKKTKTLKSVWRKGNPVATVEKVVKRQPKNVNVDKGELTTITVEKVEXXXXXXXXXXXX 214
           A KK+KTLKSVWRKGNPVATVEKVVK    N+   + E   +   KVE            
Sbjct: 182 ASKKSKTLKSVWRKGNPVATVEKVVKDASNNITNTEREGPEVG-RKVETQPRIPLRPTQP 240

Query: 215 TLK---------------PVIKRPVILIDVGATTKSPAVETTSAAKAK 313
            L+               PV+K+PVIL DVGA  KS  ++ T + K +
Sbjct: 241 PLRAQPKLQAKPSVAPPPPVLKKPVILKDVGAAPKSSGIDETDSGKTR 288


>ref|XP_002317604.1| predicted protein [Populus trichocarpa] gi|222860669|gb|EEE98216.1|
           predicted protein [Populus trichocarpa]
          Length = 1031

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/101 (43%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
 Frame = +2

Query: 44  KTKTLKSVWRKGNPVATVEKVVKRQPKNVN-VDKGELTTITVEKVEXXXXXXXXXXXXTL 220
           KTKTLKSVWRKG+ VA + KVVK  PK  N V KGE  T+   K+E             L
Sbjct: 199 KTKTLKSVWRKGDSVAALPKVVKEVPKASNRVIKGEPKTVEGAKLESQSTVPLKPPQPPL 258

Query: 221 K--------------PVIKRPVILIDVGATTKSPAVETTSA 301
           +              P+IK+PVIL DVGA  KSP  + T +
Sbjct: 259 RPQPKLQGKPSVAPPPMIKKPVILKDVGAAPKSPVKDETGS 299


>ref|XP_002532827.1| mitochondrial translational initiation factor, putative [Ricinus
           communis] gi|223527418|gb|EEF29557.1| mitochondrial
           translational initiation factor, putative [Ricinus
           communis]
          Length = 1033

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
 Frame = +2

Query: 2   NQRNGAPVTRGAFKKTKTLKSVWRKGNPVATVEKVVKRQPKNVN-VDKGELTTITVEKVE 178
           N R     + GA +KTKTLKSVWRKG+ V++V+KVVK  PK +N + K +  T    K+E
Sbjct: 193 NSRIAKSESSGATRKTKTLKSVWRKGDTVSSVQKVVKEAPKVINKLVKEDTITGEGTKLE 252

Query: 179 XXXXXXXXXXXXTLK--------------PVIKRPVILIDVGATTKSP 280
                        L+              PV+K+PVIL DVGA  + P
Sbjct: 253 SQSSFPLRPVQPPLRPQPKLQAKPSVAPPPVMKKPVILKDVGAAPRPP 300


>ref|XP_004151183.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
           [Cucumis sativus] gi|449528237|ref|XP_004171112.1|
           PREDICTED: translation initiation factor IF-2,
           chloroplastic-like [Cucumis sativus]
          Length = 1023

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 14/115 (12%)
 Frame = +2

Query: 11  NGAPVTRGAFKKTKTLKSVWRKGNPVATVEKVVKRQPKNVNVDKGELTTITVEKVEXXXX 190
           N  PV   A +K KTLKSVWRKG+ VA+V+K+V    K    D+ E       KVE    
Sbjct: 188 NSKPVNSMANRKYKTLKSVWRKGDTVASVQKIVAEPSK--PKDEVEAKPRGTSKVEPQSR 245

Query: 191 XXXXXXXXTLK--------------PVIKRPVILIDVGATTKSPAVETTSAAKAK 313
                    +K              P++K+PV+L DVGA T +   ET +AAK K
Sbjct: 246 AAFQPPQPPVKPQPKLQEKPLAATPPILKKPVVLKDVGAATMTADDETNTAAKTK 300


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