BLASTX nr result

ID: Angelica22_contig00043522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043522
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887150.1| hypothetical protein ARALYDRAFT_475894 [Arab...    76   3e-12
ref|NP_001117565.1| RING/U-box domain-containing protein [Arabid...    74   1e-11
ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...    70   1e-10
gb|AAF97967.1|AC000103_17 F21J9.24 [Arabidopsis thaliana]              70   2e-10
ref|NP_973908.1| RING/U-box domain-containing protein [Arabidops...    70   2e-10

>ref|XP_002887150.1| hypothetical protein ARALYDRAFT_475894 [Arabidopsis lyrata subsp.
           lyrata] gi|297332991|gb|EFH63409.1| hypothetical protein
           ARALYDRAFT_475894 [Arabidopsis lyrata subsp. lyrata]
          Length = 132

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
 Frame = -1

Query: 218 EDEDTYNEPSSPRRVFTSKYGSM----MWEKRVTMEECCCVCLCRFKEDEDVSELCYCQH 51
           ED+  + +    RR+  + +GS        +R  ME  CCVCLC FKE+E+VSEL  C+H
Sbjct: 50  EDDQAHEDSKRRRRISVTHFGSAENRGSKHEREAME--CCVCLCGFKEEEEVSELVSCKH 107

Query: 50  LFHKVCLEKWFDNQHT 3
            FH  CL+KWF N HT
Sbjct: 108 YFHTACLDKWFSNDHT 123


>ref|NP_001117565.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|332196588|gb|AEE34709.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 133

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = -1

Query: 227 ADTEDEDTYNEPSSPRRVFTSKYGSMMWEKRVTMEEC----CCVCLCRFKEDEDVSELCY 60
           A  +++D  +E S  RR  +  +   + E R +  E     CCVCLC FKE+E+VSEL  
Sbjct: 46  ARNKEDDQDHEDSKRRRRISITHFESLCENRGSRNEREAMDCCVCLCGFKEEEEVSELVS 105

Query: 59  CQHLFHKVCLEKWFDNQHT 3
           C+H FH  CL+KWF N HT
Sbjct: 106 CKHYFHSACLDKWFGNNHT 124


>ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Vitis vinifera]
           gi|296081356|emb|CBI16789.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
 Frame = -1

Query: 215 DEDTYNEPSSP-------RRVFTSKYGSMMWEKRVTMEEC----CCVCLCRFKEDEDVSE 69
           +ED  NE  SP       RRV  +++ S+          C    CCVCLCRF+ +E+VSE
Sbjct: 49  EEDPSNEEYSPMSENAKERRVSVTQFKSLSHSSGTGTGWCSSMDCCVCLCRFEAEEEVSE 108

Query: 68  LCYCQHLFHKVCLEKWFDNQHT 3
           L  C+H FHK C EKWFDN+H+
Sbjct: 109 LS-CKHFFHKGCWEKWFDNKHS 129


>gb|AAF97967.1|AC000103_17 F21J9.24 [Arabidopsis thaliana]
          Length = 131

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = -1

Query: 224 DTEDEDTYNEPSSPRRVFTSKYGSMMWEKRVTMEEC---CCVCLCRFKEDEDVSELCYCQ 54
           D E ED +      RR+  +++ S+        EE    CCVCLC FKE+E+VSEL  C+
Sbjct: 50  DDEPEDDF----VTRRISITQFKSLCENIEEEEEEKGVECCVCLCGFKEEEEVSELVSCK 105

Query: 53  HLFHKVCLEKWFDNQHT 3
           H FH+ CL+ WF N HT
Sbjct: 106 HFFHRACLDNWFGNNHT 122


>ref|NP_973908.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|48958501|gb|AAT47803.1| At1g24580 [Arabidopsis
           thaliana] gi|58652104|gb|AAW80877.1| At1g24580
           [Arabidopsis thaliana] gi|332192427|gb|AEE30548.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 113

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = -1

Query: 224 DTEDEDTYNEPSSPRRVFTSKYGSMMWEKRVTMEEC---CCVCLCRFKEDEDVSELCYCQ 54
           D E ED +      RR+  +++ S+        EE    CCVCLC FKE+E+VSEL  C+
Sbjct: 32  DDEPEDDF----VTRRISITQFKSLCENIEEEEEEKGVECCVCLCGFKEEEEVSELVSCK 87

Query: 53  HLFHKVCLEKWFDNQHT 3
           H FH+ CL+ WF N HT
Sbjct: 88  HFFHRACLDNWFGNNHT 104


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