BLASTX nr result

ID: Angelica22_contig00043276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043276
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27434.3| unnamed protein product [Vitis vinifera]               84   9e-15
gb|AFK36982.1| unknown [Medicago truncatula]                           83   2e-14
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    83   2e-14
ref|XP_003588898.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    80   1e-13
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    80   2e-13

>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/137 (35%), Positives = 73/137 (53%)
 Frame = +2

Query: 2   SKAWRDIWITHPNLVFDDQFFSQLVSKKVHVVDEQAKLSEVSTTISNILLVHSGPILTFR 181
           SK WR  W+T P+LV D+    +L+ +      +Q+  +E+ + +  +LL+H GPI+ F 
Sbjct: 72  SKKWRYKWLTLPHLVIDNALGKKLLGR------QQSAKNELVSAVYQVLLLHKGPIVKFV 125

Query: 182 LTVPRNLPLHRCVDVWIKNISNNGVRTLELCNMAPFSYKIPSSVFSCSVLTHLWLTDCIL 361
           L V   L  +  +D WI  +SN+ ++   L       YK+PS  F+   L HL L  C  
Sbjct: 126 LEVDE-LESYSDIDHWINFLSNHDIQEFTLSRAKTEHYKLPSYFFTFLHLRHLKLRGCAF 184

Query: 362 NPPHNFGGFCKLIDVEL 412
            PP  F GF KLI ++L
Sbjct: 185 RPPPRFKGFSKLISLQL 201


>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
 Frame = +2

Query: 2   SKAWRDIWITHPNLVFDDQFFSQLVSKKVHVVDEQAKLSEVSTTISNILLVHSGPILTFR 181
           S+ WRDIWI+ P L FD  FF     K     D +    EV   I+ +LL+H+GPI  F 
Sbjct: 44  SRKWRDIWISFPWLEFDKDFFDLYDLK-----DFKDHSPEVCIIITEVLLLHNGPINKFT 98

Query: 182 LTVPR--NLPLHRCVDVWIKNISNNGVRTLELCNMAPFSYKIPSSVFSCSVLTHLWLTDC 355
           L +P   N+P   C+  WI  +S  GV+ ++L +     Y++PS  FS   LTH+ +   
Sbjct: 99  LFIPSGFNIPFG-CIVKWILFLSRKGVKFIQLASNESVPYRVPSHFFSFQKLTHVRICKF 157

Query: 356 ILNPPHNFGGFCKLI 400
            L  P NF GF  L+
Sbjct: 158 KLLVPPNFCGFKSLV 172


>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
 Frame = +2

Query: 2   SKAWRDIWITHPNLVFDDQFFSQLVSKKVHVVDEQAKLSEVSTTISNILLVHSGPILTFR 181
           S+ WRDIWI+ P L FD  FF     K     D +    EV   I+ +LL+H+GPI  F 
Sbjct: 125 SRKWRDIWISFPWLEFDKDFFDLYDLK-----DFKDHSPEVCIIITEVLLLHNGPINKFT 179

Query: 182 LTVPR--NLPLHRCVDVWIKNISNNGVRTLELCNMAPFSYKIPSSVFSCSVLTHLWLTDC 355
           L +P   N+P   C+  WI  +S  GV+ ++L +     Y++PS  FS   LTH+ +   
Sbjct: 180 LFIPSGFNIPFG-CIVKWILFLSRKGVKFIQLASNESVPYRVPSHFFSFQKLTHVRICKF 238

Query: 356 ILNPPHNFGGFCKLI 400
            L  P NF GF  L+
Sbjct: 239 KLLVPPNFCGFKSLV 253


>ref|XP_003588898.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477946|gb|AES59149.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 403

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
 Frame = +2

Query: 2   SKAWRDIWITHPNLVFDDQFFSQLVSKKVHVVDEQAKLSEVSTTISNILLVHSGPILTFR 181
           S  WR+ W T P+LVFD +  S  +SK   V++     S+    + ++LL+HSGPI  F 
Sbjct: 36  SSEWRNKWSTQPDLVFDSRCVSTAISKDPSVIE-----SKFLRIVDHVLLLHSGPINKFE 90

Query: 182 LT-----VPRNLPLHRCVDVWIKNISNNGVRTLELCNMAPFSYKIPSSVFSCSVLTHLWL 346
           ++     +  ++     +D WI++++   ++   L       YKIPSS+FSC  L HL L
Sbjct: 91  VSDSYRDIIIDVNAMADIDRWIRHLTGRHIKEFVLDICFDQRYKIPSSLFSCQGLHHLDL 150

Query: 347 TDCILNPPHNFGGF 388
             C L PP  F GF
Sbjct: 151 NYCWLKPPTKFEGF 164


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 55/143 (38%), Positives = 76/143 (53%)
 Frame = +2

Query: 2   SKAWRDIWITHPNLVFDDQFFSQLVSKKVHVVDEQAKLSEVSTTISNILLVHSGPILTFR 181
           S  WR  W T PNLVFD Q  S   S+ + V+      S++S  I ++LL+HSGPI  F+
Sbjct: 46  STKWRYKWATLPNLVFDSQCISD-TSEDLLVIK-----SKLSRIIDHVLLLHSGPIKKFK 99

Query: 182 LTVPRNLPLHRCVDVWIKNISNNGVRTLELCNMAPFSYKIPSSVFSCSVLTHLWLTDCIL 361
           L+  R L     +D W  +++   V+   L       YKIPS +FSC  L HL L +C L
Sbjct: 100 LS-HRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRYKIPSCLFSCQGLHHLELFNCWL 158

Query: 362 NPPHNFGGFCKLIDVELVLVRIT 430
            PP  F GF  L  ++L  V ++
Sbjct: 159 IPPSTFQGFRNLKSLDLQHVTLS 181


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