BLASTX nr result
ID: Angelica22_contig00043194
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00043194
(695 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323570.1| predicted protein [Populus trichocarpa] gi|2... 229 3e-58
ref|XP_002528114.1| double-stranded RNA binding protein, putativ... 226 3e-57
ref|XP_003552235.1| PREDICTED: RNA polymerase II C-terminal doma... 224 1e-56
ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal doma... 224 2e-56
ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal doma... 224 2e-56
>ref|XP_002323570.1| predicted protein [Populus trichocarpa] gi|222868200|gb|EEF05331.1|
predicted protein [Populus trichocarpa]
Length = 563
Score = 229 bits (585), Expect = 3e-58
Identities = 124/216 (57%), Positives = 150/216 (69%), Gaps = 3/216 (1%)
Frame = -3
Query: 639 CKLESSD--EHSELYDMYIDCIKXXXXXXXXXXXXXXXXVAMVSKYRNCACFWCYAVPSG 466
CKLESS E S L +++ C VAM SK + CFWC+AVP G
Sbjct: 65 CKLESSSPMEQSHLINLHASCFHEVKTAVVLIGDEEIHLVAMPSKQKKFPCFWCFAVPVG 124
Query: 465 LYSVCLRMLDLRCLWIVLDLDETLIVGNTMKSFNDRIASLRRRIARETDPVRKAEIFSEM 286
LY CLRML++RCL IV DLDETLIV NTMK F DRI +LR I RE DP+R + + +EM
Sbjct: 125 LYDSCLRMLNMRCLSIVFDLDETLIVANTMKLFEDRIETLRGWIGREQDPMRVSGMIAEM 184
Query: 285 VLYEEDQRLLKQYIDRDSVVENGNVYNVQAE-VVTICESQKRIVRPVIRLLDKSIVLTRI 109
Y +D+ LLKQYI+ D V++NG +Y VQ E V+ + +R+VRPVIRL +K+IVLTRI
Sbjct: 185 KRYIDDRLLLKQYIENDVVMDNGKMYKVQLEDVLRSSDGHERVVRPVIRLPEKNIVLTRI 244
Query: 108 NPEIRDTSVLVRLRPAWEDLRRHLHSKERKRFEVYV 1
NPEIRDTSVLVRLRPAWEDLR +L +K RKRFEVYV
Sbjct: 245 NPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYV 280
>ref|XP_002528114.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223532503|gb|EEF34293.1| double-stranded RNA binding
protein, putative [Ricinus communis]
Length = 786
Score = 226 bits (577), Expect = 3e-57
Identities = 123/216 (56%), Positives = 151/216 (69%), Gaps = 3/216 (1%)
Frame = -3
Query: 639 CKLESSD--EHSELYDMYIDCIKXXXXXXXXXXXXXXXXVAMVSKYRNCACFWCYAVPSG 466
CKLESS E L +++ C VAM SK + CFWC+ VP G
Sbjct: 65 CKLESSSPIEQPHLINLHASCFYEFKTAVVSIGNEEIHLVAMPSKQKKFPCFWCFPVPLG 124
Query: 465 LYSVCLRMLDLRCLWIVLDLDETLIVGNTMKSFNDRIASLRRRIARETDPVRKAEIFSEM 286
LY CL ML+LRCL IV DLDETLIV NTMKSF DRI +LR I RETDP+R + + +E+
Sbjct: 125 LYDSCLGMLNLRCLSIVFDLDETLIVANTMKSFEDRIEALRVWINRETDPMRISGMSAEL 184
Query: 285 VLYEEDQRLLKQYIDRDSVVENGNVYNVQAEVVTI-CESQKRIVRPVIRLLDKSIVLTRI 109
Y +D+ LLKQY++ D V++NG ++ VQ E V + E+Q+R+VRPVIRL DK+IVLTRI
Sbjct: 185 KRYMDDRMLLKQYLESDFVMDNGKMFKVQLEEVPLSSETQERLVRPVIRLQDKNIVLTRI 244
Query: 108 NPEIRDTSVLVRLRPAWEDLRRHLHSKERKRFEVYV 1
NPEIRDTSVLVRLRPAWE+LR +L +K RKRFEVYV
Sbjct: 245 NPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYV 280
>ref|XP_003552235.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
2-like [Glycine max]
Length = 806
Score = 224 bits (572), Expect = 1e-56
Identities = 122/216 (56%), Positives = 148/216 (68%), Gaps = 3/216 (1%)
Frame = -3
Query: 639 CKLESS--DEHSELYDMYIDCIKXXXXXXXXXXXXXXXXVAMVSKYRNCACFWCYAVPSG 466
CKL+SS E EL ++ C V+M SK + CFWC+AVP G
Sbjct: 73 CKLDSSVATEQKELIAIHASCFYEMKTAVVVVNDEEIHLVSMPSKRKKFPCFWCFAVPLG 132
Query: 465 LYSVCLRMLDLRCLWIVLDLDETLIVGNTMKSFNDRIASLRRRIARETDPVRKAEIFSEM 286
LY CL ML+LRCL IV DLDETLIV NTMKSF DRI +LR + RETDP+R + SE+
Sbjct: 133 LYDACLAMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLLRETDPLRVQGMSSEL 192
Query: 285 VLYEEDQRLLKQYIDRDSVVENGNVYNVQ-AEVVTICESQKRIVRPVIRLLDKSIVLTRI 109
Y ED+ LLKQY + D+VV+NG VY VQ E + S +++VRPV+RL +++IVLTRI
Sbjct: 193 KRYLEDRLLLKQYAESDTVVDNGKVYKVQMEEAPPLSGSHEKLVRPVVRLQERNIVLTRI 252
Query: 108 NPEIRDTSVLVRLRPAWEDLRRHLHSKERKRFEVYV 1
NPEIRDTSVLVRLRPAWEDLR +L +K RKRFEVYV
Sbjct: 253 NPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYV 288
>ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
2-like [Cucumis sativus]
Length = 837
Score = 224 bits (570), Expect = 2e-56
Identities = 121/216 (56%), Positives = 148/216 (68%), Gaps = 3/216 (1%)
Frame = -3
Query: 639 CKLESS--DEHSELYDMYIDCIKXXXXXXXXXXXXXXXXVAMVSKYRNCACFWCYAVPSG 466
CKL+SS E L ++ C VAM SK +N CFWC+AVP G
Sbjct: 65 CKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFAVPCG 124
Query: 465 LYSVCLRMLDLRCLWIVLDLDETLIVGNTMKSFNDRIASLRRRIARETDPVRKAEIFSEM 286
LY CL ML+LRCL IV DLDETLIV NTMKSF DRI +LR IARE DP+R + + +E+
Sbjct: 125 LYLSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRIWIAREADPLRISGMSAEL 184
Query: 285 VLYEEDQRLLKQYIDRDSVVENGNVYNVQAEVVTICESQ-KRIVRPVIRLLDKSIVLTRI 109
Y ED+ LLKQYI+ D+V +NG ++ Q E V +++VRP+IRLLDK++VLTRI
Sbjct: 185 KRYVEDRLLLKQYIEHDTVNDNGRIFKAQLEEVPPLNGNCEKVVRPIIRLLDKNLVLTRI 244
Query: 108 NPEIRDTSVLVRLRPAWEDLRRHLHSKERKRFEVYV 1
NPEIRDTSVLVRLRPAWEDLR +L ++ RKRFEVYV
Sbjct: 245 NPEIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYV 280
>ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
2-like [Cucumis sativus]
Length = 829
Score = 224 bits (570), Expect = 2e-56
Identities = 121/216 (56%), Positives = 148/216 (68%), Gaps = 3/216 (1%)
Frame = -3
Query: 639 CKLESS--DEHSELYDMYIDCIKXXXXXXXXXXXXXXXXVAMVSKYRNCACFWCYAVPSG 466
CKL+SS E L ++ C VAM SK +N CFWC+AVP G
Sbjct: 65 CKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFWCFAVPCG 124
Query: 465 LYSVCLRMLDLRCLWIVLDLDETLIVGNTMKSFNDRIASLRRRIARETDPVRKAEIFSEM 286
LY CL ML+LRCL IV DLDETLIV NTMKSF DRI +LR IARE DP+R + + +E+
Sbjct: 125 LYLSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRIWIAREADPLRISGMSAEL 184
Query: 285 VLYEEDQRLLKQYIDRDSVVENGNVYNVQAEVVTICESQ-KRIVRPVIRLLDKSIVLTRI 109
Y ED+ LLKQYI+ D+V +NG ++ Q E V +++VRP+IRLLDK++VLTRI
Sbjct: 185 KRYVEDRLLLKQYIEHDTVNDNGRIFKAQLEEVPPLNGNCEKVVRPIIRLLDKNLVLTRI 244
Query: 108 NPEIRDTSVLVRLRPAWEDLRRHLHSKERKRFEVYV 1
NPEIRDTSVLVRLRPAWEDLR +L ++ RKRFEVYV
Sbjct: 245 NPEIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYV 280