BLASTX nr result

ID: Angelica22_contig00043142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043142
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   215   3e-54
ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containi...   212   3e-53
ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containi...   208   3e-52
ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containi...   197   6e-49
ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49

>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  215 bits (548), Expect = 3e-54
 Identities = 102/138 (73%), Positives = 118/138 (85%)
 Frame = -3

Query: 415 VNWDVVAWRTLLNACHVHRNYDLGKQIAKIVLQMYPDDVGTYTLLSNMHAKAKRWDGVAD 236
           V WDVVAWRTLL+ACHVH+NY LGK++A++VLQM P DVGTY LLSNM+AKAKRWDGV  
Sbjct: 496 VKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVK 555

Query: 235 IRKLMRERNIKKEPGLSWIEIRNNTCVFVSDDKSHPELKQIHEKVKDLLNKITLLGYVPD 56
           IRKLMRERN+KKEPG SWIEIRN+  VFVS+ K+HPE  QI+EKV++LL  I  +GYVPD
Sbjct: 556 IRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPD 615

Query: 55  IATVFHDVEAEQKEEYLS 2
           IA VFHDVE EQK EY+S
Sbjct: 616 IAAVFHDVEDEQKREYVS 633


>ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  212 bits (539), Expect = 3e-53
 Identities = 100/138 (72%), Positives = 113/138 (81%)
 Frame = -3

Query: 415 VNWDVVAWRTLLNACHVHRNYDLGKQIAKIVLQMYPDDVGTYTLLSNMHAKAKRWDGVAD 236
           V WDVVAWRTLLNACH+HRNY+LGKQI + V+QM P DVGTYTLLSNMHAKA++WDGV  
Sbjct: 496 VKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVK 555

Query: 235 IRKLMRERNIKKEPGLSWIEIRNNTCVFVSDDKSHPELKQIHEKVKDLLNKITLLGYVPD 56
           IRKLM+ERNIKKEPG SW++IRNNT VFVS+  +HPE  QI EKV+ LL  I  LGY PD
Sbjct: 556 IRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPD 615

Query: 55  IATVFHDVEAEQKEEYLS 2
           +  V HDVE EQKE YLS
Sbjct: 616 VGVVLHDVEDEQKEGYLS 633


>ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  208 bits (530), Expect = 3e-52
 Identities = 101/138 (73%), Positives = 117/138 (84%)
 Frame = -3

Query: 415 VNWDVVAWRTLLNACHVHRNYDLGKQIAKIVLQMYPDDVGTYTLLSNMHAKAKRWDGVAD 236
           V WDVVAWRTLLNACHVHRNYDLG++IA+ VLQM P DVGTYTLLSNM+AKA+RWDGV  
Sbjct: 487 VKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVT 546

Query: 235 IRKLMRERNIKKEPGLSWIEIRNNTCVFVSDDKSHPELKQIHEKVKDLLNKITLLGYVPD 56
           IRKLMRERNIKKEPG SW++IRN+  VF+S+  +HPE  QI++KV+ LL  I  LGYVP+
Sbjct: 547 IRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPN 606

Query: 55  IATVFHDVEAEQKEEYLS 2
           IA+V HDVE EQKE YLS
Sbjct: 607 IASVLHDVEDEQKEGYLS 624


>ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like, partial [Cucumis sativus]
          Length = 390

 Score =  197 bits (502), Expect = 6e-49
 Identities = 92/138 (66%), Positives = 112/138 (81%)
 Frame = -3

Query: 415 VNWDVVAWRTLLNACHVHRNYDLGKQIAKIVLQMYPDDVGTYTLLSNMHAKAKRWDGVAD 236
           +NWDVV+WRTLLNAC+VH++YD GK+IA+ +LQ+ P DVGTY LLSNMHA+ +RWD V +
Sbjct: 183 INWDVVSWRTLLNACYVHKHYDKGKKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVE 242

Query: 235 IRKLMRERNIKKEPGLSWIEIRNNTCVFVSDDKSHPELKQIHEKVKDLLNKITLLGYVPD 56
           IRKLMRERN+KKEPG+SW+EIRN   VF S+D  HPE   I+E VKDLL+KI  LGYVPD
Sbjct: 243 IRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPD 302

Query: 55  IATVFHDVEAEQKEEYLS 2
           I  V HD+E EQK + LS
Sbjct: 303 IDNVLHDIEDEQKVDNLS 320


>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  197 bits (501), Expect = 7e-49
 Identities = 92/138 (66%), Positives = 110/138 (79%)
 Frame = -3

Query: 415 VNWDVVAWRTLLNACHVHRNYDLGKQIAKIVLQMYPDDVGTYTLLSNMHAKAKRWDGVAD 236
           V WDVVAWRTLLNACHVH+NY LG+ +A+ VL+M P+DVGTYTLLSN++AK KRWDGV  
Sbjct: 500 VKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVK 559

Query: 235 IRKLMRERNIKKEPGLSWIEIRNNTCVFVSDDKSHPELKQIHEKVKDLLNKITLLGYVPD 56
           +RKLMR++ IKKEPG+SWIEI N T +F S+D  HP+  Q ++KVK+LL  I  LGY PD
Sbjct: 560 VRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPD 619

Query: 55  IATVFHDVEAEQKEEYLS 2
           I  V HDVE EQKE YLS
Sbjct: 620 IGAVLHDVEDEQKEYYLS 637


Top